ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8076625	uncharacterized LOC8076625
sbi-r.1	8069738	uncharacterized LOC8069738
zma-u.5	109943460	uncharacterized LOC109943460
zma-u.5	103640534	BTB/POZ domain-containing protein
zma-u.5	100273144	uncharacterized LOC100273144
osa-u.5	4348989	uncharacterized LOC4348989
tae-r.2	123119526	uncharacterized LOC123119526
tae-r.2	123110528	uncharacterized LOC123110528
tae-r.2	123106595	uncharacterized LOC123106595
hvu-r.1	123396274	uncharacterized LOC123396274
bdi-r.1	100821251	uncharacterized LOC100821251
ath-u.5	AT3G53270	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
gma-u.5	100811149	uncharacterized LOC100811149
sly-u.5	101266838	uncharacterized LOC101266838
bra-r.6	103829921	uncharacterized LOC103829921
vvi-u.5	100262987	uncharacterized LOC100262987
ppo-u.5	18099925	uncharacterized LOC18099925
ppo-u.5	18097717	uncharacterized LOC18097717
mtr-u.5	11436125	uncharacterized LOC11436125
mtr-u.5	25493963	uncharacterized LOC25493963
ghi-r.1	121229217	uncharacterized LOC121229217
ghi-r.1	107907537	uncharacterized LOC107907537
bna-r.1	BNAC06G14520D	uncharacterized BNAC06G14520D
bna-r.1	106356685	uncharacterized LOC106356685
sot-r.1	107058115	uncharacterized LOC107058115
sot-r.1	102585984	uncharacterized LOC102585984
cit-r.1	102622940	uncharacterized LOC102622940
cit-r.1	102621221	uncharacterized LOC102621221
nta-r.1	107808513	uncharacterized LOC107808513
nta-r.1	107773107	uncharacterized LOC107773107
nta-r.1	107773028	uncharacterized LOC107773028
cre-r.1	CHLRE_06g279183v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0042795 [list] [network] snRNA transcription by RNA polymerase II	(3 genes)	IEA
GO:0042796 [list] [network] snRNA transcription by RNA polymerase III	(3 genes)	IEA

GO CC

GO:0019185 [list] [network] snRNA-activating protein complex

(3 genes)

IEA

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding

(711 genes)

IEA

Protein

XP_021301839.1 [sequence] [blastp]
XP_021301840.1 [sequence] [blastp]
XP_021301841.1 [sequence] [blastp]
XP_021301842.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, cyto_pero 2, cyto_plas 2	(predict for XP_021301839.1)
cyto 4, cyto_E.R. 3, chlo 2, nucl 1, cysk 1, cysk_nucl 1	(predict for XP_021301840.1)
cyto 4, nucl 4, cyto_E.R. 2, cysk 1	(predict for XP_021301841.1)
cyto 4, nucl 4, cyto_E.R. 2, cysk 1	(predict for XP_021301842.1)

Subcellular
localization
TargetP

scret 4, other 4, mito 3	(predict for XP_021301839.1)
other 6, scret 4, chlo 3	(predict for XP_021301840.1)
other 9	(predict for XP_021301841.1)
other 9	(predict for XP_021301842.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8076625	sbi-r.1 for 8069738	zma-u.5 for 109943460	zma-u.5 for 103640534	zma-u.5 for 100273144	osa-u.5 for 4348989	tae-r.2 for 123119526	tae-r.2 for 123110528	tae-r.2 for 123106595	hvu-r.1 for 123396274	bdi-r.1 for 100821251	ath-u.5 for AT3G53270	gma-u.5 for 100811149	sly-u.5 for 101266838	bra-r.6 for 103829921	vvi-u.5 for 100262987	ppo-u.5 for 18099925	ppo-u.5 for 18097717	mtr-u.5 for 11436125	mtr-u.5 for 25493963	ghi-r.1 for 121229217	ghi-r.1 for 107907537	bna-r.1 for BNAC06G14520D	bna-r.1 for 106356685	sot-r.1 for 107058115	sot-r.1 for 102585984	cit-r.1 for 102622940	cit-r.1 for 102621221	nta-r.1 for 107808513	nta-r.1 for 107773107	nta-r.1 for 107773028	cre-r.1 for CHLRE_06g279183v5

Ortholog

Ortholog ID: 6582

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC8076625

uncharacterized LOC8069738

uncharacterized LOC109943460

BTB/POZ domain-containing protein

uncharacterized LOC100273144

uncharacterized LOC4348989

uncharacterized LOC123119526

uncharacterized LOC123110528

uncharacterized LOC123106595

uncharacterized LOC123396274

uncharacterized LOC100821251

Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

uncharacterized LOC100811149

uncharacterized LOC101266838

uncharacterized LOC103829921

uncharacterized LOC100262987

uncharacterized LOC18099925

uncharacterized LOC18097717

uncharacterized LOC11436125

uncharacterized LOC25493963

uncharacterized LOC121229217

uncharacterized LOC107907537

uncharacterized BNAC06G14520D

uncharacterized LOC106356685

uncharacterized LOC107058115

uncharacterized LOC102585984

uncharacterized LOC102622940

uncharacterized LOC102621221

uncharacterized LOC107808513

uncharacterized LOC107773107

uncharacterized LOC107773028

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00514	Other types of O-glycan biosynthesis	2
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	2
bna00062	Fatty acid elongation	2
bna01212	Fatty acid metabolism	2
bna00540	Lipopolysaccharide biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	5

Expression

Expression pattern

Entrez Gene ID^*

8076625

8069738

109943460

103640534

100273144

4348989

123119526

123110528

123106595

123396274

100821251

824494

100811149

101266838

103829921

100262987

18099925

18097717

11436125

25493963

121229217

107907537

106452447

106356685

107058115

102585984

102622940

102621221

107808513

107773107

107773028

5720876

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8076625 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076625 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	1	3	1	1	1	1	1	1	1	2	2	2	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8076625 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076625 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**