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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077448   transcription termination factor MTEF18, mitochondrial 
 zma-u.5   100281476   uncharacterized LOC100281476 
 osa-u.5   4342999   transcription termination factor MTEF18, mitochondrial 
 ath-u.5   SHOT1   Mitochondrial transcription termination factor family protein 
 gma-u.5   100812245   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100800581   transcription termination factor MTEF18, mitochondrial 
 sly-u.5   101250749   transcription termination factor MTEF18, mitochondrial 
 vvi-u.5   100244389   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   18105039   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11426054   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   25499985   transcription termination factor MTEF18, mitochondrial 

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Top 50 coexpressed genes to 8077448 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077448 (sbi-r.1 coexpression data)

CoexMap"8077448"


sbiLOC8077448 | Entrez gene ID : 8077448      
Species sbi zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra tae nta bna
Paralog 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (71 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (461 genes)  IEA  
Protein XP_002460710.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_002460710.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002460710.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077448

.
zma-u.5
for
100281476

.
osa-u.5
for
4342999

.
ath-u.5
for
SHOT1

.
gma-u.5
for
100812245

.
gma-u.5
for
100800581

.
sly-u.5
for
101250749

.
vvi-u.5
for
100244389

.
ppo-u.5
for
18105039

.
mtr-u.5
for
11426054

.
mtr-u.5
for
25499985

.


Ortholog ID: 10164
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol SHOT1 LOC100800581 LOC100812245 LOC101250749 LOC4342999 LOC100281476 LOC103841894 LOC100244389 LOC18105039 LOC11426054 LOC25499985 LOC123128110 LOC123137898 LOC123403055 LOC107926115 LOC107937428 LOC106415627 LOC106415392 LOC8077448 LOC102591340 LOC102608833 LOC100821081 LOC107775892 LOC107800788
Function* Mitochondrial transcription termination factor family protein transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100281476 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial uncharacterized LOC102591340 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825211 100800581 100812245 101250749 4342999 100281476 103841894 100244389 18105039 11426054 25499985 123128110 123137898 123403055 107926115 107937428 106415627 106415392 8077448 102591340 102608833 100821081 107775892 107800788
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