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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100381604   Pentatricopeptide repeat-containing protein mitochondrial 
 osa-u.5   4331425   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 gma-u.5   100777584   pentatricopeptide repeat-containing protein At1g09900 
 sly-u.5   101245075   pentatricopeptide repeat-containing protein 
 vvi-u.5   109121972   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 ppo-u.5   7455264   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 mtr-u.5   25495583   pentatricopeptide repeat-containing protein At1g09900 

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Top 50 coexpressed genes to 100381604 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100381604 (zma-u.5 coexpression data)

CoexMap"8077978"


sbiLOC8077978 | Entrez gene ID : 8077978      
Species zma osa gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002468625.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_002468625.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002468625.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100381604

.
osa-u.5
for
4331425

.
gma-u.5
for
100777584

.
sly-u.5
for
101245075

.
vvi-u.5
for
109121972

.
ppo-u.5
for
7455264

.
mtr-u.5
for
25495583

.


Ortholog ID: 12576
Species gma sly osa zma vvi ppo mtr tae hvu ghi ghi sot cit nta nta
Symbol LOC100777584 LOC101245075 LOC4331425 LOC100381604 LOC109121972 LOC7455264 LOC25495583 LOC123099034 LOC123450876 LOC121219128 LOC107954041 LOC102590671 LOC107177063 LOC107796685 LOC107790835
Function* pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g56030, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like uncharacterized LOC107796685 uncharacterized LOC107790835
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00630 Glyoxylate and dicarboxylate metabolism 6
osa00260 Glycine, serine and threonine metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03013 Nucleocytoplasmic transport 3
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777584 101245075 4331425 100381604 109121972 7455264 25495583 123099034 123450876 121219128 107954041 102590671 107177063 107796685 107790835
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