ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8078678	formin-like protein 1
sbi-r.1	8054851	formin-like protein 15
sbi-r.1	8058382	formin-like protein 13
sbi-r.1	8081866	formin-like protein 8
zma-u.5	103643397	formin-like protein 4
zma-u.5	103639456	formin-like protein 8
zma-u.5	103636403	formin-like protein 1
osa-u.5	4331986	formin-like protein 8
osa-u.5	4325107	formin-like protein 1
osa-u.5	4343760	formin-like protein 13
tae-r.2	123122207	formin-like protein 15
tae-r.2	123044364	formin-like protein 13
tae-r.2	123093067	formin-like protein 8
hvu-r.1	123425489	formin-like protein 13
hvu-r.1	123445059	formin-like protein 1
hvu-r.1	123399956	formin-like protein 15
bdi-r.1	100841717	formin-like protein 1
bdi-r.1	100834554	formin-like protein 15
bdi-r.1	100825546	formin-like protein 8
ath-u.5	AT2G43800	Actin-binding FH2 (formin homology 2) family protein
ath-u.5	AFH1	formin homology 1
ath-u.5	FH6	formin homolog 6
gma-u.5	100786203	formin-like protein 2
gma-u.5	100815532	formin-like protein 2
gma-u.5	100806929	formin-like protein 6
sly-u.5	101268261	formin-like protein 6
sly-u.5	101249109	formin-like protein 2
sly-u.5	101254726	formin-like protein 1
bra-r.6	103860063	formin-like protein 2
bra-r.6	103860284	formin-like protein 1
bra-r.6	103866746	formin-like protein 2
vvi-u.5	100245626	formin-like protein 1
vvi-u.5	100252716	formin-like protein 1
vvi-u.5	100249049	formin-like protein 6
ppo-u.5	7484589	formin-like protein 2
ppo-u.5	7471130	formin-like protein 1
ppo-u.5	7469365	formin-like protein 1
mtr-u.5	25500744	formin-like protein 1
mtr-u.5	11434954	formin-like protein 6
mtr-u.5	11435547	formin-like protein 1
ghi-r.1	107923446	formin-like protein 1
ghi-r.1	107914580	formin-like protein 2
ghi-r.1	107913280	formin-like protein 6
bna-r.1	125584327	formin-like protein 2
bna-r.1	106431195	formin-like protein 6
bna-r.1	106435916	formin-like protein 1
sot-r.1	102600023	formin-like protein 2
sot-r.1	102595554	formin-like protein 2
sot-r.1	102589453	formin-like protein 1
cit-r.1	102607386	formin-like protein 6
cit-r.1	102614784	formin-like protein 1
cit-r.1	102615981	formin-like protein 2
nta-r.1	107831355	formin-like protein 6
nta-r.1	107761036	formin-like protein 6
nta-r.1	107822536	formin-like protein 1

Top 50 coexpressed genes to 8078678 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8078678 (sbi-r.1 coexpression data)

CoexMap"8078678"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045010 [list] [network] actin nucleation	(24 genes)	IEA
GO:0030036 [list] [network] actin cytoskeleton organization	(77 genes)	IEA

GO CC

GO MF

GO:0051015 [list] [network] actin filament binding

(70 genes)

IEA

Protein

XP_002458919.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, vacu 3, E.R. 1, golg 1, chlo_mito 1

(predict for XP_002458919.1)

Subcellular
localization
TargetP

scret 3

(predict for XP_002458919.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8078678	sbi-r.1 for 8054851	sbi-r.1 for 8058382	sbi-r.1 for 8081866	zma-u.5 for 103643397	zma-u.5 for 103639456	zma-u.5 for 103636403	osa-u.5 for 4331986	osa-u.5 for 4325107	osa-u.5 for 4343760	tae-r.2 for 123122207	tae-r.2 for 123044364	tae-r.2 for 123093067	hvu-r.1 for 123425489	hvu-r.1 for 123445059	hvu-r.1 for 123399956	bdi-r.1 for 100841717	bdi-r.1 for 100834554	bdi-r.1 for 100825546	ath-u.5 for AT2G43800	ath-u.5 for AFH1	ath-u.5 for FH6	gma-u.5 for 100786203	gma-u.5 for 100815532	gma-u.5 for 100806929	sly-u.5 for 101268261	sly-u.5 for 101249109	sly-u.5 for 101254726	bra-r.6 for 103860063	bra-r.6 for 103860284	bra-r.6 for 103866746	vvi-u.5 for 100245626	vvi-u.5 for 100252716	vvi-u.5 for 100249049	ppo-u.5 for 7484589	ppo-u.5 for 7471130	ppo-u.5 for 7469365	mtr-u.5 for 25500744	mtr-u.5 for 11434954	mtr-u.5 for 11435547	ghi-r.1 for 107923446	ghi-r.1 for 107914580	ghi-r.1 for 107913280	bna-r.1 for 125584327	bna-r.1 for 106431195	bna-r.1 for 106435916	sot-r.1 for 102600023	sot-r.1 for 102595554	sot-r.1 for 102589453	cit-r.1 for 102607386	cit-r.1 for 102614784	cit-r.1 for 102615981	nta-r.1 for 107831355	nta-r.1 for 107761036	nta-r.1 for 107822536

Ortholog

Ortholog ID: 706

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

AFH1

FH6

Function^*

formin-like protein 1

formin-like protein 15

formin-like protein 13

formin-like protein 4

formin-like protein 8

Formin-like protein 1

formin-like protein 8

formin-like protein 13

formin-like protein 15

formin-like protein 13

formin-like protein 15

formin-like protein 1

formin-like protein 15

formin-like protein 1

formin-like protein 8

formin-like protein 13

Actin-binding FH2 (formin homology 2) family protein

formin homology 1

formin homolog 6

formin-like protein 2

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 6

formin-like protein 2

formin-like protein 1

formin-like protein 6

formin-like protein 1

formin-like protein 2

formin-like protein 6

formin-like protein 2

formin-like protein 6

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	6
zma01230	Biosynthesis of amino acids	5
zma00710	Carbon fixation by Calvin cycle	5
zma00030	Pentose phosphate pathway	3
zma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5
osa03040	Spliceosome	3
osa03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	3
vvi04517	IgSF CAM signaling	3
vvi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00941	Flavonoid biosynthesis	2
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	7

Expression

Expression pattern

Entrez Gene ID^*

8078678

8054851

8058382

103643397

103632209

100192542

4331986

4343760

4347588

123122207

123044364

123112732

123445059

123399956

100841717

100825546

100838643

818984

822136

836883

100786203

100806929

100801837

101268261

101254726

101260547

103860063

103860284

103874050

100245626

100252716

100249049

7471130

7469365

7459949

25500744

11435547

25493532

107913280

107912501

107888696

106435916

106388343

106360161

102600023

102589453

102588979

102607386

102614784

102615981

107831355

107815696

107800915

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8078678 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8078678 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**