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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079713   uncharacterized LOC8079713 
 zma-u.5   100280558   uncharacterized LOC100280558 
 zma-u.5   100285956   uncharacterized LOC100285956 
 osa-u.5   4344476   uncharacterized LOC4344476 
 osa-u.5   4340949   uncharacterized LOC4340949 
 ath-u.5   AT5G55140   ribosomal protein L30 family protein 
 gma-u.5   100819606   50S ribosomal protein L30 
 gma-u.5   100306695   uncharacterized LOC100306695 
 sly-u.5   101257728   uncharacterized LOC101257728 
 ppo-u.5   7489881   uncharacterized LOC7489881 
 ppo-u.5   7462077   uncharacterized LOC7462077 
 mtr-u.5   25502138   50S ribosomal protein L30 
 mtr-u.5   25500447   50S ribosomal protein L30 

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Top 50 coexpressed genes to 8079713 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079713 (sbi-r.1 coexpression data)

CoexMap"8079713"


sbiLOC8079713 | Entrez gene ID : 8079713      
Species sbi zma osa ath gma sly ppo mtr bra nta cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 2 2 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (147 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002463616.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002463616.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002463616.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079713

.
zma-u.5
for
100280558

.
zma-u.5
for
100285956

.
osa-u.5
for
4344476

.
osa-u.5
for
4340949

.
ath-u.5
for
AT5G55140

.
gma-u.5
for
100819606

.
gma-u.5
for
100306695

.
sly-u.5
for
101257728

.
ppo-u.5
for
7489881

.
ppo-u.5
for
7462077

.
mtr-u.5
for
25502138

.
mtr-u.5
for
25500447

.


Ortholog ID: 6379
Species ath gma gma sly osa osa zma zma bra bra ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G55140 LOC100306695 LOC100819606 LOC101257728 LOC4344476 LOC4340949 LOC100285956 LOC100280558 LOC103844960 LOC103851899 LOC7489881 LOC7462077 LOC25500447 LOC25502138 LOC123051291 LOC123043415 LOC123424504 LOC107927825 LOC107908760 LOC106418474 LOC111198631 CHLRE_05g234659v5 LOC8079713 LOC102589641 LOC102614536 LOC100845563 LOC107822410 LOC107821148
Function* ribosomal protein L30 family protein uncharacterized LOC100306695 50S ribosomal protein L30 uncharacterized LOC101257728 uncharacterized LOC4344476 uncharacterized LOC4340949 uncharacterized LOC100285956 uncharacterized LOC100280558 50S ribosomal protein L30 50S ribosomal protein L30 uncharacterized LOC7489881 uncharacterized LOC7462077 50S ribosomal protein L30 50S ribosomal protein L30 uncharacterized LOC123051291 uncharacterized LOC123043415 uncharacterized LOC123424504 50S ribosomal protein L30 50S ribosomal protein L30 50S ribosomal protein L30-like 50S ribosomal protein L30 uncharacterized protein uncharacterized LOC8079713 50S ribosomal protein L30 uncharacterized LOC102614536 50S ribosomal protein L30 uncharacterized LOC107822410 uncharacterized LOC107821148
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00190 Oxidative phosphorylation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 4
sot03420 Nucleotide excision repair 4
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835607 100306695 100819606 101257728 4344476 4340949 100285956 100280558 103844960 103851899 7489881 7462077 25500447 25502138 123051291 123043415 123424504 107927825 107908760 106418474 111198631 5726193 8079713 102589641 102614536 100845563 107822410 107821148
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