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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079717   WD repeat-containing protein 20 homolog 
 zma-u.5   100285992   nucleotide binding protein 
 zma-u.5   100280352   Transducin/WD40 repeat-like superfamily protein 
 zma-u.5   100280640   nucleotide binding protein 
 osa-u.5   4351637   probable catabolite repression protein creC 
 ath-u.5   AT2G37160   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT3G53390   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100777042   dystrophia myotonica WD repeat-containing protein 
 gma-u.5   100782580   dystrophia myotonica WD repeat-containing protein 
 gma-u.5   100787074   probable catabolite repression protein creC 
 sly-u.5   101248062   probable catabolite repression protein creC 
 sly-u.5   101248907   probable catabolite repression protein creC 
 vvi-u.5   100243197   uncharacterized LOC100243197 
 vvi-u.5   100255339   uncharacterized LOC100255339 
 ppo-u.5   18100206   uncharacterized LOC18100206 
 ppo-u.5   7467620   uncharacterized LOC7467620 
 mtr-u.5   11430659   WD repeat-containing protein 20 

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Top 50 coexpressed genes to 8079717 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079717 (sbi-r.1 coexpression data)

CoexMap"8079717"


sbiLOC8079717 | Entrez gene ID : 8079717      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 1 2 3 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002449096.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_002449096.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002449096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079717

.
zma-u.5
for
100285992

.
zma-u.5
for
100280352

.
zma-u.5
for
100280640

.
osa-u.5
for
4351637

.
ath-u.5
for
AT2G37160

.
ath-u.5
for
AT3G53390

.
gma-u.5
for
100777042

.
gma-u.5
for
100782580

.
gma-u.5
for
100787074

.
sly-u.5
for
101248062

.
sly-u.5
for
101248907

.
vvi-u.5
for
100243197

.
vvi-u.5
for
100255339

.
ppo-u.5
for
18100206

.
ppo-u.5
for
7467620

.
mtr-u.5
for
11430659

.


Ortholog ID: 3438
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT2G37160 AT3G53390 LOC100777042 LOC100805756 LOC101248062 LOC101248907 LOC4351637 LOC100280352 LOC100285992 LOC103863431 LOC103841264 LOC100255339 LOC100243197 LOC7467620 LOC18100206 LOC11430659 LOC123091273 LOC123102814 LOC123395196 LOC123447954 LOC107899651 LOC107913481 LOC106371439 LOC106433959 CHLRE_03g172200v5 LOC8079717 LOC8076287 LOC102593543 LOC102587030 LOC102630155 LOC100826915 LOC100838334 LOC107778309 LOC107761420
Function* Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein dystrophia myotonica WD repeat-containing protein dystrophia myotonica WD repeat-containing protein probable catabolite repression protein creC probable catabolite repression protein creC probable catabolite repression protein creC Transducin/WD40 repeat-like superfamily protein nucleotide binding protein dystrophia myotonica WD repeat-containing protein WD repeat-containing protein 20 uncharacterized LOC100255339 uncharacterized LOC100243197 uncharacterized LOC7467620 uncharacterized LOC18100206 WD repeat-containing protein 20 WD repeat-containing protein 20 dystrophia myotonica WD repeat-containing protein dystrophia myotonica WD repeat-containing protein-like WD repeat-containing protein 20-like dystrophia myotonica WD repeat-containing protein probable catabolite repression protein creC dystrophia myotonica WD repeat-containing protein WD repeat-containing protein 20 uncharacterized protein WD repeat-containing protein 20 homolog dystrophia myotonica WD repeat-containing protein WD repeat-containing protein 20 homolog probable catabolite repression protein creC uncharacterized LOC102630155 WD repeat-containing protein 20 dystrophia myotonica WD repeat-containing protein uncharacterized LOC107778309 putative catabolite repression protein creC
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma04075 Plant hormone signal transduction 2
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00310 Lysine degradation 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 5
cre04145 Phagosome 5
cre04141 Protein processing in endoplasmic reticulum 3
cre04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
nta03460 Fanconi anemia pathway 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818292 824507 100777042 100805756 101248062 101248907 4351637 100280352 100285992 103863431 103841264 100255339 100243197 7467620 18100206 11430659 123091273 123102814 123395196 123447954 107899651 107913481 106371439 106433959 5728917 8079717 8076287 102593543 102587030 102630155 100826915 100838334 107778309 107761420
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