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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8080140   60S ribosomal protein L36a 
 zma-u.5   100284825   60S ribosomal protein L44 
 zma-u.5   100280597   60S ribosomal protein L44 
 zma-u.5   118473053   60S ribosomal protein L36a 
 osa-u.5   4343416   large ribosomal subunit protein eL42 
 osa-u.5   4343124   large ribosomal subunit protein eL42 
 osa-u.5   9271813   large ribosomal subunit protein eL42 
 ath-u.5   AT3G23390   Zinc-binding ribosomal protein family protein 
 ath-u.5   AT4G14320   Zinc-binding ribosomal protein family protein 
 gma-u.5   100789948   60S ribosomal protein L44 
 gma-u.5   100789419   60S ribosomal protein L44 
 gma-u.5   100305488   putative 60S ribosomal protein L36a 
 sly-u.5   101253271   large ribosomal subunit protein eL42 
 sly-u.5   101268875   large ribosomal subunit protein eL42 
 vvi-u.5   104878992   large ribosomal subunit protein eL42 
 vvi-u.5   100259458   large ribosomal subunit protein eL42 
 vvi-u.5   100261906   large ribosomal subunit protein eL42 
 ppo-u.5   7456311   60S ribosomal protein L44 
 ppo-u.5   7466878   60S ribosomal protein L44 
 ppo-u.5   7455525   60S ribosomal protein L44 
 mtr-u.5   11424907   60S ribosomal protein L44 
 mtr-u.5   11433415   60S ribosomal protein L44 
 mtr-u.5   25493298   60S ribosomal protein L44 

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Top 50 coexpressed genes to 8080140 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8080140 (sbi-r.1 coexpression data)

CoexMap"8080140"


sbiLOC8080140 | Entrez gene ID : 8080140    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 2 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002460794.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  plas 1,  extr 1,  mito_plas 1,  cyto_plas 1  (predict for XP_002460794.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002460794.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8080140

.
zma-u.5
for
100284825

.
zma-u.5
for
100280597

.
zma-u.5
for
118473053

.
osa-u.5
for
4343416

.
osa-u.5
for
4343124

.
osa-u.5
for
9271813

.
ath-u.5
for
AT3G23390

.
ath-u.5
for
AT4G14320

.
gma-u.5
for
100789948

.
gma-u.5
for
100789419

.
gma-u.5
for
100305488

.
sly-u.5
for
101253271

.
sly-u.5
for
101268875

.
vvi-u.5
for
104878992

.
vvi-u.5
for
100259458

.
vvi-u.5
for
100261906

.
ppo-u.5
for
7456311

.
ppo-u.5
for
7466878

.
ppo-u.5
for
7455525

.
mtr-u.5
for
11424907

.
mtr-u.5
for
11433415

.
mtr-u.5
for
25493298

.


Ortholog ID: 1109
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT3G23390 AT4G14320 LOC100305488 LOC100795041 LOC101268875 LOC9271813 LOC9266960 LOC100280597 LOC103633242 LOC103828745 LOC103860001 LOC100261906 LOC100259458 LOC7455525 LOC7456311 LOC25493298 LOC11424907 LOC123104543 LOC123044656 LOC123425872 LOC123452524 LOC107894041 LOC107886896 LOC106439716 LOC106397235 CHLRE_06g310700v5 LOC8080140 LOC8080172 LOC102589971 LOC102604878 LOC102626204 LOC100844347 LOC100843847 LOC107802399 LOC107767162
Function* Zinc-binding ribosomal protein family protein Zinc-binding ribosomal protein family protein putative 60S ribosomal protein L36a 60S ribosomal protein L44 large ribosomal subunit protein eL42 large ribosomal subunit protein eL42 large ribosomal subunit protein eL42 60S ribosomal protein L44 60S ribosomal protein L36a 60S ribosomal protein L36a 60S ribosomal protein L36a large ribosomal subunit protein eL42 large ribosomal subunit protein eL42 60S ribosomal protein L44 60S ribosomal protein L44 60S ribosomal protein L44 60S ribosomal protein L44 60S ribosomal protein L36a 60S ribosomal protein L36a 60S ribosomal protein L36a-like 60S ribosomal protein L36a 60S ribosomal protein L44 60S ribosomal protein L44-like 60S ribosomal protein L36a 60S ribosomal protein L36a ribosomal protein L36a;uncharacterized protein 60S ribosomal protein L36a 60S ribosomal protein L44 60S ribosomal protein L44 60S ribosomal protein L44-like 60S ribosomal protein L44 60S ribosomal protein L36a 60S ribosomal protein L36a large ribosomal subunit protein eL42 large ribosomal subunit protein eL42
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr03420 Nucleotide excision repair 4
mtr03030 DNA replication 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821920 827074 100305488 100795041 101268875 9271813 9266960 100280597 103633242 103828745 103860001 100261906 100259458 7455525 7456311 25493298 11424907 123104543 123044656 123425872 123452524 107894041 107886896 106439716 106397235 5716795 8080140 8080172 102589971 102604878 102626204 100844347 100843847 107802399 107767162
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