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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8080905   vacuolar protein sorting-associated protein 18 homolog 
 zma-u.5   103642454   vacuolar sorting protein 18 
 osa-u.5   4344807   vacuolar sorting protein 18 
 ath-u.5   AT1G12470   zinc ion binding protein 
 gma-u.5   100793073   vacuolar sorting protein 18 
 gma-u.5   100818056   vacuolar sorting protein 18 
 sly-u.5   101246251   vacuolar sorting protein 18 
 vvi-u.5   100254609   vacuolar sorting protein 18 
 ppo-u.5   7494438   vacuolar sorting protein 18 
 mtr-u.5   11411031   vacuolar sorting protein 18 

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Top 50 coexpressed genes to 8080905 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8080905 (sbi-r.1 coexpression data)

CoexMap"8080905"


sbiLOC8080905 | Entrez gene ID : 8080905      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0007032 [list] [network] endosome organization  (7 genes)  IEA  
GO:0006904 [list] [network] vesicle docking involved in exocytosis  (12 genes)  IEA  
GO:0007033 [list] [network] vacuole organization  (36 genes)  IEA  
GO:0048284 [list] [network] organelle fusion  (45 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (256 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (412 genes)  IEA  
GO CC
GO:0030897 [list] [network] HOPS complex  (5 genes)  IEA  
GO:0005768 [list] [network] endosome  (165 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (180 genes)  IEA  
Protein XP_002443948.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002443948.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_002443948.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8080905

.
zma-u.5
for
103642454

.
osa-u.5
for
4344807

.
ath-u.5
for
AT1G12470

.
gma-u.5
for
100793073

.
gma-u.5
for
100818056

.
sly-u.5
for
101246251

.
vvi-u.5
for
100254609

.
ppo-u.5
for
7494438

.
mtr-u.5
for
11411031

.


Ortholog ID: 8232
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT1G12470 LOC100818056 LOC100793073 LOC101246251 LOC4344807 LOC103642454 LOC103836160 LOC103871998 LOC100254609 LOC7494438 LOC11411031 LOC123113257 LOC123122771 LOC123452156 LOC121213698 LOC107928911 LOC106445576 LOC106382388 CHLRE_07g328550v5 LOC8080905 LOC102603014 LOC102579913 LOC102612233 LOC100830636 LOC107829786 LOC107826915
Function* zinc ion binding protein vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18 vacuolar sorting protein 18-like uncharacterized protein vacuolar protein sorting-associated protein 18 homolog vacuolar protein sorting-associated protein 18 homolog vacuolar protein sorting-associated protein 18 homolog vacuolar sorting protein 18 vacuolar protein sorting-associated protein 18 homolog vacuolar sorting protein 18 vacuolar sorting protein 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 4
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04142 Lysosome 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae04148 Efferocytosis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae04148 Efferocytosis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi04144 Endocytosis 4
ghi05100 Bacterial invasion of epithelial cells 4
ghi04814 Motor proteins 3
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi04144 Endocytosis 4
ghi05100 Bacterial invasion of epithelial cells 4
ghi04814 Motor proteins 3
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04148 Efferocytosis 2
cit04142 Lysosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837804 100818056 100793073 101246251 4344807 103642454 103836160 103871998 100254609 7494438 11411031 123113257 123122771 123452156 121213698 107928911 106445576 106382388 5716214 8080905 102603014 102579913 102612233 100830636 107829786 107826915
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