ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8081243	protein WVD2-like 1
sbi-r.1	8056637	protein WVD2-like 2
zma-u.5	100284611	uncharacterized LOC100284611
zma-u.5	100283540	seed specific protein Bn15D14A
zma-u.5	100282810	seed specific protein Bn15D14A
osa-u.5	4334440	protein WVD2-like 2
osa-u.5	4342589	protein WVD2-like 1
tae-r.2	123123237	protein WVD2-like 3
tae-r.2	123105438	protein WVD2-like 1
tae-r.2	123113725	protein WVD2-like 1
hvu-r.1	123452753	protein WVD2-like 1
bdi-r.1	100829627	protein WVD2-like 1
bdi-r.1	100827305	protein WVD2-like 2
ath-u.5	AT3G23090	TPX2 (targeting protein for Xklp2) protein family
ath-u.5	WVD2	TPX2 (targeting protein for Xklp2) protein family
ath-u.5	AT1G54460	TPX2 (targeting protein for Xklp2) protein family
gma-u.5	100798109	TPX2 domain-containing protein
gma-u.5	100797456	uncharacterized LOC100797456
gma-u.5	100795305	protein WVD2-like 1
sly-u.5	101256524	protein WVD2-like 2
sly-u.5	101253093	protein WVD2-like 3
sly-u.5	101246088	protein WVD2-like 3
bra-r.6	103874585	protein WAVE-DAMPENED 2
bra-r.6	103858645	protein WVD2-like 2
vvi-u.5	100258034	protein WVD2-like 3
vvi-u.5	100246099	protein WVD2-like 2
ppo-u.5	18098994	protein WVD2-like 2
ppo-u.5	7487681	protein WVD2-like 2
ppo-u.5	7492430	protein WVD2-like 3
mtr-u.5	11421346	protein WVD2-like 3
mtr-u.5	25484626	protein WVD2-like 1
mtr-u.5	112416494	protein WVD2-like 1
ghi-r.1	107889378	protein WVD2-like 2
ghi-r.1	107893278	protein WVD2-like 3
ghi-r.1	107894973	protein WVD2-like 1
bna-r.1	125575653	protein WVD2-like 3
bna-r.1	106451791	protein WVD2-like 3
sot-r.1	102592024	protein WVD2-like 1
sot-r.1	102588366	uncharacterized LOC102588366
sot-r.1	102605864	protein WVD2-like 1
cit-r.1	102629047	protein WVD2-like 2
cit-r.1	102620677	protein WVD2-like 3
cit-r.1	102607486	uncharacterized LOC102607486
nta-r.1	107787178	uncharacterized LOC107787178
nta-r.1	107802559	uncharacterized LOC107802559
nta-r.1	107764043	protein WVD2-like 3

Top 50 coexpressed genes to 8081243 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8081243 (sbi-r.1 coexpression data)

CoexMap"8081243"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0000226 [list] [network] microtubule cytoskeleton organization

(108 genes)

IEA

GO CC

GO MF

GO:0008017 [list] [network] microtubule binding

(142 genes)

IEA

Protein

XP_002466283.1 [sequence] [blastp]
XP_021305019.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_002466283.1)
nucl 9, chlo 1, cyto 1	(predict for XP_021305019.1)

Subcellular
localization
TargetP

other 6	(predict for XP_002466283.1)
other 7, mito 3	(predict for XP_021305019.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8081243	sbi-r.1 for 8056637	zma-u.5 for 100284611	zma-u.5 for 100283540	zma-u.5 for 100282810	osa-u.5 for 4334440	osa-u.5 for 4342589	tae-r.2 for 123123237	tae-r.2 for 123105438	tae-r.2 for 123113725	hvu-r.1 for 123452753	bdi-r.1 for 100829627	bdi-r.1 for 100827305	ath-u.5 for AT3G23090	ath-u.5 for WVD2	ath-u.5 for AT1G54460	gma-u.5 for 100798109	gma-u.5 for 100797456	gma-u.5 for 100795305	sly-u.5 for 101256524	sly-u.5 for 101253093	sly-u.5 for 101246088	bra-r.6 for 103874585	bra-r.6 for 103858645	vvi-u.5 for 100258034	vvi-u.5 for 100246099	ppo-u.5 for 18098994	ppo-u.5 for 7487681	ppo-u.5 for 7492430	mtr-u.5 for 11421346	mtr-u.5 for 25484626	mtr-u.5 for 112416494	ghi-r.1 for 107889378	ghi-r.1 for 107893278	ghi-r.1 for 107894973	bna-r.1 for 125575653	bna-r.1 for 106451791	sot-r.1 for 102592024	sot-r.1 for 102588366	sot-r.1 for 102605864	cit-r.1 for 102629047	cit-r.1 for 102620677	cit-r.1 for 102607486	nta-r.1 for 107787178	nta-r.1 for 107802559	nta-r.1 for 107764043

Ortholog

Ortholog ID: 1664

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

WVD2

Function^*

protein WVD2-like 1

protein WVD2-like 2

seed specific protein Bn15D14A

protein WVD2-like 2

protein WVD2-like 1

protein WVD2-like 3

protein WVD2-like 1

protein WVD2-like 2

TPX2 (targeting protein for Xklp2) protein family

uncharacterized LOC100797456

uncharacterized LOC100810060

protein WVD2-like 1

protein WVD2-like 2

protein WVD2-like 3

protein WAVE-DAMPENED 2

protein WVD2-like 3

protein WVD2-like 2

protein WVD2-like 3

protein WVD2-like 1

protein WVD2-like 3

protein WVD2-like 1

protein WAVE-DAMPENED 2

protein WVD2-like 3

protein WAVE-DAMPENED 2

protein WVD2-like 3

protein WVD2-like 1

uncharacterized LOC102588366

protein WVD2-like 1

protein WVD2-like 2

protein WVD2-like 3

uncharacterized LOC102607486

protein WVD2-like 3

uncharacterized LOC142162308

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04144	Endocytosis	2
sbi03040	Spliceosome	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	3
tae00670	One carbon pool by folate	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	3
tae00670	One carbon pool by folate	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	3
ath00940	Phenylpropanoid biosynthesis	3
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	4
gma04517	IgSF CAM signaling	4
gma04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2
sly00541	Biosynthesis of various nucleotide sugars	2
sly01250	Biosynthesis of nucleotide sugars	2
sly04814	Motor proteins	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	6
ghi04517	IgSF CAM signaling	6
ghi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	9
bna00941	Flavonoid biosynthesis	4
bna00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
bna00460	Cyanoamino acid metabolism	2
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

8081243

8056637

100283540

100282810

100191142

4334440

4342589

123123237

123105438

123113725

123452753

100829627

100827305

821884

832970

841888

100797456

100810060

100807705

101256524

101253093

101246088

103874585

103833948

100258034

100246099

18098994

7492430

7473455

11421346

25484626

112416494

107893278

107899165

107937866

106451791

106352202

106367511

102592024

102588366

102605864

102629047

102620677

102607486

107764043

107768961

142162308

The preparation time of this page was 1.4 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	3	1	2	3	3	3	2	2	3	3	3	2	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8081243 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8081243 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**