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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8081406   protein transport protein SEC13 homolog B 
 zma-u.5   100283879   SEC13-related protein 
 zma-u.5   100282624   SEC13-related protein 
 osa-u.5   4328228   protein transport protein SEC13 homolog B 
 ath-u.5   AT2G30050   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT3G01340   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100787533   protein transport protein SEC13 homolog B-like 
 gma-u.5   100794696   protein transport protein SEC13 homolog B 
 gma-u.5   100783637   protein transport protein SEC13 homolog B 
 sly-u.5   101257847   protein transport protein SEC13 homolog B 
 sly-u.5   101265789   protein transport protein SEC13 homolog B 
 vvi-u.5   100249128   protein SEC13 homolog-like 
 vvi-u.5   104877626   protein transport protein SEC13 homolog B 
 vvi-u.5   100261919   protein transport protein SEC13 homolog B 
 ppo-u.5   7474864   protein transport protein SEC13 homolog B 
 ppo-u.5   7459086   protein transport protein SEC13 homolog B 
 mtr-u.5   25489031   protein transport protein SEC13 homolog B 

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Top 50 coexpressed genes to 8081406 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8081406 (sbi-r.1 coexpression data)

CoexMap"8081406"


sbiLOC8081406 | Entrez gene ID : 8081406    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 3 2 3 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sbi04141 [list] [network] Protein processing in endoplasmic reticulum (204 genes)
GO BP
GO:0090114 [list] [network] COPII-coated vesicle budding  (17 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (44 genes)  IEA  
GO CC
GO:0031080 [list] [network] nuclear pore outer ring  (8 genes)  IEA  
GO:0030127 [list] [network] COPII vesicle coat  (19 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (443 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002454939.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 3  (predict for XP_002454939.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002454939.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8081406

.
zma-u.5
for
100283879

.
zma-u.5
for
100282624

.
osa-u.5
for
4328228

.
ath-u.5
for
AT2G30050

.
ath-u.5
for
AT3G01340

.
gma-u.5
for
100787533

.
gma-u.5
for
100794696

.
gma-u.5
for
100783637

.
sly-u.5
for
101257847

.
sly-u.5
for
101265789

.
vvi-u.5
for
100249128

.
vvi-u.5
for
104877626

.
vvi-u.5
for
100261919

.
ppo-u.5
for
7474864

.
ppo-u.5
for
7459086

.
mtr-u.5
for
25489031

.


Ortholog ID: 3204
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol AT2G30050 AT3G01340 LOC100783637 LOC100794696 LOC101257847 LOC101265789 LOC4328228 LOC100282624 LOC100283879 LOC103867988 LOC103857287 LOC100261919 LOC100249128 LOC7459086 LOC7474864 LOC25489031 LOC123180055 LOC123187756 LOC123443134 LOC107924493 LOC107939882 LOC111205436 LOC106434877 CHLRE_17g715750v5 LOC8081004 LOC8081406 LOC102581372 LOC102577858 LOC102613333 LOC102631283 LOC100831324 LOC107777830 LOC107805515
Function* transducin family protein / WD-40 repeat family protein Transducin/WD40 repeat-like superfamily protein protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B SEC13-related protein SEC13-related protein protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein SEC13 homolog-like protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B-like protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B-like protein transport protein SEC13 homolog B uncharacterized protein protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B-like protein transport SEC13-like protein protein transport protein SEC13 homolog B-like protein transport protein SEC13 homolog B-like protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B protein transport protein SEC13 homolog B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01250 Biosynthesis of nucleotide sugars 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 Nucleocytoplasmic transport 3
ath04141 Protein processing in endoplasmic reticulum 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma04141 Protein processing in endoplasmic reticulum 4
gma03050 Proteasome 3
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma04141 Protein processing in endoplasmic reticulum 4
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01250 Biosynthesis of nucleotide sugars 4
osa04144 Endocytosis 2
osa00040 Pentose and glucuronate interconversions 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma00190 Oxidative phosphorylation 3
zma03013 Nucleocytoplasmic transport 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra04016 MAPK signaling pathway - plant 2
bra04070 Phosphatidylinositol signaling system 2
bra04075 Plant hormone signal transduction 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra04144 Endocytosis 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 9
vvi03050 Proteasome 3
vvi04145 Phagosome 2
vvi03013 Nucleocytoplasmic transport 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 5
vvi04144 Endocytosis 4
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03013 Nucleocytoplasmic transport 2
ppo04016 MAPK signaling pathway - plant 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo03013 Nucleocytoplasmic transport 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 2
tae01040 Biosynthesis of unsaturated fatty acids 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 5
tae03013 Nucleocytoplasmic transport 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu03013 Nucleocytoplasmic transport 2
hvu04626 Plant-pathogen interaction 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
cre04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 13
sot04145 Phagosome 3
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
bdi04144 Endocytosis 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta04141 Protein processing in endoplasmic reticulum 6
nta00190 Oxidative phosphorylation 5
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta04141 Protein processing in endoplasmic reticulum 6
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817556 821216 100783637 100794696 101257847 101265789 4328228 100282624 100283879 103867988 103857287 100261919 100249128 7459086 7474864 25489031 123180055 123187756 123443134 107924493 107939882 111205436 106434877 5725988 8081004 8081406 102581372 102577858 102613333 102631283 100831324 107777830 107805515
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