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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082408   psbP domain-containing protein 6, chloroplastic 
 zma-u.5   100278794   uncharacterized LOC100278794 
 osa-u.5   4327544   psbP domain-containing protein 6, chloroplastic 
 ath-u.5   PPD6   thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 
 gma-u.5   100813771   psbP domain-containing protein 6, chloroplastic-like 
 gma-u.5   100795124   psbP domain-containing protein 6, chloroplastic 
 sly-u.5   101248113   psbP domain-containing protein 6, chloroplastic 
 vvi-u.5   100246497   psbP domain-containing protein 6, chloroplastic 
 ppo-u.5   7479651   psbP domain-containing protein 6, chloroplastic 
 mtr-u.5   11417401   psbP domain-containing protein 6, chloroplastic 

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Top 50 coexpressed genes to 8082408 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082408 (sbi-r.1 coexpression data)

CoexMap"8082408"


sbiLOC8082408 | Entrez gene ID : 8082408    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (85 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (19 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (26 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (44 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (285 genes)  IEA  
Protein XP_002456499.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002456499.2)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002456499.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082408

.
zma-u.5
for
100278794

.
osa-u.5
for
4327544

.
ath-u.5
for
PPD6

.
gma-u.5
for
100813771

.
gma-u.5
for
100795124

.
sly-u.5
for
101248113

.
vvi-u.5
for
100246497

.
ppo-u.5
for
7479651

.
mtr-u.5
for
11417401

.


Ortholog ID: 9543
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PPD6 LOC100813771 LOC100795124 LOC101248113 LOC4327544 LOC100278794 LOC103863093 LOC100246497 LOC7479651 LOC11417401 LOC123079473 LOC123062336 LOC123444636 LOC107893632 LOC107918501 LOC111214994 LOC106445230 CHLRE_06g280150v5 LOC8082408 LOC102597757 LOC102628645 LOC100845273 LOC107819052 LOC142176594
Function* thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) psbP domain-containing protein 6, chloroplastic-like psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic uncharacterized LOC100278794 psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic uncharacterized protein psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic psbP domain-containing protein 6, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly03010 Ribosome 3
sly00260 Glycine, serine and threonine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 5
bra01200 Carbon metabolism 5
bra00195 Photosynthesis 4
bra00710 Carbon fixation by Calvin cycle 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 8
bna01200 Carbon metabolism 8
bna00195 Photosynthesis 2
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 4
sot01200 Carbon metabolism 4
sot03010 Ribosome 4
sot00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00750 Vitamin B6 metabolism 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824832 100813771 100795124 101248113 4327544 100278794 103863093 100246497 7479651 11417401 123079473 123062336 123444636 107893632 107918501 111214994 106445230 5720904 8082408 102597757 102628645 100845273 107819052 142176594
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