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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082562   leucine--tRNA ligase, cytoplasmic 
 zma-u.5   103645798   leucine--tRNA ligase, cytoplasmic 
 zma-u.5   103647355   leucine--tRNA ligase, cytoplasmic 
 osa-u.5   4346920   leucine--tRNA ligase, cytoplasmic 
 osa-u.5   4347497   leucine--tRNA ligase, cytoplasmic 
 ath-u.5   AT1G09620   ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase 
 gma-u.5   100812453   leucine--tRNA ligase, cytoplasmic 
 gma-u.5   100777060   leucine--tRNA ligase, cytoplasmic 
 sly-u.5   101260692   leucine--tRNA ligase, cytoplasmic 
 sly-u.5   101251146   leucine--tRNA ligase, cytoplasmic-like 
 vvi-u.5   100248927   leucine--tRNA ligase, cytoplasmic 
 vvi-u.5   100249854   leucine--tRNA ligase, cytoplasmic 
 ppo-u.5   18111133   leucine--tRNA ligase, cytoplasmic 
 ppo-u.5   18098342   leucine--tRNA ligase, cytoplasmic 
 mtr-u.5   11422357   leucine--tRNA ligase, cytoplasmic 
 mtr-u.5   25489111   leucine--tRNA ligase, cytoplasmic 

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Top 50 coexpressed genes to 8082562 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082562 (sbi-r.1 coexpression data)

CoexMap"8082562"


sbiLOC8082562 | Entrez gene ID : 8082562      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00970 [list] [network] Aminoacyl-tRNA biosynthesis (105 genes)
GO BP
GO:0006429 [list] [network] leucyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO MF
GO:0004823 [list] [network] leucine-tRNA ligase activity  (3 genes)  IEA  
GO:0002161 [list] [network] aminoacyl-tRNA deacylase activity  (16 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002448716.1 [sequence] [blastp]
XP_021318805.1 [sequence] [blastp]
XP_021318806.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_002448716.1)
cyto 5,  nucl 4  (predict for XP_021318805.1)
cyto 5,  nucl 4  (predict for XP_021318806.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002448716.1)
other 9  (predict for XP_021318805.1)
other 9  (predict for XP_021318806.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082562

.
zma-u.5
for
103645798

.
zma-u.5
for
103647355

.
osa-u.5
for
4346920

.
osa-u.5
for
4347497

.
ath-u.5
for
AT1G09620

.
gma-u.5
for
100812453

.
gma-u.5
for
100777060

.
sly-u.5
for
101260692

.
sly-u.5
for
101251146

.
vvi-u.5
for
100248927

.
vvi-u.5
for
100249854

.
ppo-u.5
for
18111133

.
ppo-u.5
for
18098342

.
mtr-u.5
for
11422357

.
mtr-u.5
for
25489111

.


Ortholog ID: 3993
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT1G09620 LOC100777060 LOC100812453 LOC101251146 LOC101260692 LOC4346920 LOC4347497 LOC103645798 LOC103647355 LOC103843342 LOC103871736 LOC100248927 LOC100249854 LOC18111133 LOC18098342 LOC11422357 LOC25489111 LOC123069454 LOC123077968 LOC123425095 LOC123443308 LOC107961863 LOC107941996 LOC106417702 LOC106420086 CHLRE_06g293582v5 LOC8084035 LOC8082562 LOC102583300 LOC102578386 LOC102615675 LOC100822013 LOC107781204 LOC107788946
Function* ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic-like uncharacterized protein leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic leucine--tRNA ligase, cytoplasmic-like leucine--tRNA ligase, cytoplasmic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 4
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
osa00230 Purine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 7
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 7
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi01230 Biosynthesis of amino acids 5
ghi00300 Lysine biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi01230 Biosynthesis of amino acids 5
ghi00300 Lysine biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 8
cre01230 Biosynthesis of amino acids 4
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00230 Purine metabolism 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03060 Protein export 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 3
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00230 Purine metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837489 100777060 100812453 101251146 101260692 4346920 4347497 103645798 103647355 103843342 103871736 100248927 100249854 18111133 18098342 11422357 25489111 123069454 123077968 123425095 123443308 107961863 107941996 106417702 106420086 5727112 8084035 8082562 102583300 102578386 102615675 100822013 107781204 107788946
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