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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084880   DDB1- and CUL4-associated factor 8 
 zma-u.5   103634486   DDB1- and CUL4-associated factor 8 
 zma-u.5   103637246   DDB1- and CUL4-associated factor 8 
 zma-u.5   100284249   uncharacterized LOC100284249 
 osa-u.5   4332480   uncharacterized LOC4332480 
 osa-u.5   4349273   uncharacterized LOC4349273 
 ath-u.5   AT3G45620   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT4G35140   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT4G38480   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100797330   DDB1- and CUL4-associated factor 8 
 gma-u.5   100794236   DDB1- and CUL4-associated factor 8 
 gma-u.5   100776572   DDB1- and CUL4-associated factor 8 
 sly-u.5   101247968   uncharacterized LOC101247968 
 sly-u.5   101251849   uncharacterized LOC101251849 
 vvi-u.5   100253665   uncharacterized LOC100253665 
 vvi-u.5   100251996   uncharacterized LOC100251996 
 ppo-u.5   7474983   uncharacterized LOC7474983 
 ppo-u.5   7470422   uncharacterized LOC7470422 
 mtr-u.5   11408884   protein ALTERED SEED GERMINATION 2 
 mtr-u.5   25485648   DDB1- and CUL4-associated factor 8 

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Top 50 coexpressed genes to 8084880 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084880 (sbi-r.1 coexpression data)

CoexMap"8084880"


sbiLOC8084880 | Entrez gene ID : 8084880      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 3 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (16 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002468049.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_pero 3  (predict for XP_002468049.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002468049.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084880

.
zma-u.5
for
103634486

.
zma-u.5
for
103637246

.
zma-u.5
for
100284249

.
osa-u.5
for
4332480

.
osa-u.5
for
4349273

.
ath-u.5
for
AT3G45620

.
ath-u.5
for
AT4G35140

.
ath-u.5
for
AT4G38480

.
gma-u.5
for
100797330

.
gma-u.5
for
100794236

.
gma-u.5
for
100776572

.
sly-u.5
for
101247968

.
sly-u.5
for
101251849

.
vvi-u.5
for
100253665

.
vvi-u.5
for
100251996

.
ppo-u.5
for
7474983

.
ppo-u.5
for
7470422

.
mtr-u.5
for
11408884

.
mtr-u.5
for
25485648

.


Ortholog ID: 1981
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G38480 AT3G45620 LOC100791300 LOC100776572 LOC101251849 LOC101247968 LOC4349273 LOC4332480 LOC100272942 LOC103634486 LOC103831116 LOC100251996 LOC100253665 LOC7474983 LOC7470422 LOC25485648 LOC11408884 LOC123092494 LOC123127326 LOC123448941 LOC123410580 LOC107949058 LOC107949115 LOC106375269 LOC106389922 CHLRE_07g328600v5 LOC8069208 LOC8084880 LOC102603271 LOC102585248 LOC102628870 LOC102612899 LOC100845367 LOC100829926 LOC107799567 LOC107821858
Function* Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8 uncharacterized LOC101251849 uncharacterized LOC101247968 uncharacterized LOC4349273 uncharacterized LOC4332480 nucleotide binding protein DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8-like protein 2 uncharacterized LOC100251996 uncharacterized LOC100253665 uncharacterized LOC7474983 uncharacterized LOC7470422 DDB1- and CUL4-associated factor 8 protein ALTERED SEED GERMINATION 2 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8-like DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8-like protein 2 DDB1- and CUL4-associated factor 6 uncharacterized protein DDB1- and CUL4-associated factor 6 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8-like DDB1- and CUL4-associated factor 8-like uncharacterized LOC102628870 uncharacterized LOC102612899 DDB1- and CUL4-associated factor 8 DDB1- and CUL4-associated factor 8 uncharacterized LOC107799567 uncharacterized LOC107821858
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04626 Plant-pathogen interaction 2
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
gma04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre01200 Carbon metabolism 3
cre00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830004 823704 100791300 100776572 101251849 101247968 4349273 4332480 100272942 103634486 103831116 100251996 100253665 7474983 7470422 25485648 11408884 123092494 123127326 123448941 123410580 107949058 107949115 106375269 106389922 5716213 8069208 8084880 102603271 102585248 102628870 102612899 100845367 100829926 107799567 107821858
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