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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APG2   Sec-independent periplasmic protein translocase 
 ath-r.7   APG2   Sec-independent periplasmic protein translocase 
 ath-m.9   APG2   Sec-independent periplasmic protein translocase 
 ath-e.2   APG2   Sec-independent periplasmic protein translocase 
 ath-m.4.bio   APG2   Sec-independent periplasmic protein translocase 
 ath-m.4.hor   APG2   Sec-independent periplasmic protein translocase 
 ath-m.4.lig   APG2   Sec-independent periplasmic protein translocase 
 ath-m.4.str   APG2   Sec-independent periplasmic protein translocase 
 ath-m.4.tis   APG2   Sec-independent periplasmic protein translocase 
 bra-r.6   103832770   sec-independent protein translocase protein TATC, chloroplastic 
 bra-r.6   103827606   sec-independent protein translocase protein TATC, chloroplastic 
 bna-r.1   125587734   sec-independent protein translocase protein TATC, chloroplastic-like 
 bna-r.1   125594356   sec-independent protein translocase protein TATC, chloroplastic-like 
 bna-r.1   106454450   sec-independent protein translocase protein TATC, chloroplastic 
 ghi-r.1   121210957   sec-independent protein translocase protein TATC, chloroplastic 
 ghi-r.1   107946217   sec-independent protein translocase protein TATC, chloroplastic 
 cit-r.1   102619941   sec-independent protein translocase protein TATC, chloroplastic 
 gma-u.5   100801670   sec-independent periplasmic protein translocase-like protein 
 gma-u.5   100788116   sec-independent protein translocase protein TATC, chloroplastic 
 vvi-u.5   100259443   sec-independent protein translocase protein TATC, chloroplastic 
 ppo-u.5   7475552   sec-independent protein translocase protein TATC, chloroplastic 
 mtr-u.5   25485444   sec-independent protein translocase protein TATC, chloroplastic 
 sly-u.5   101263905   sec-independent protein translocase protein TATC, chloroplastic 
 sot-r.1   102597934   sec-independent protein translocase protein TATC, chloroplastic 
 nta-r.1   107784471   sec-independent protein translocase protein TATC, chloroplastic 
 nta-r.1   107777379   sec-independent protein translocase protein TATC, chloroplastic-like 
 osa-u.5   4324478   sec-independent protein translocase protein TATC, chloroplastic-like 
 zma-u.5   103632985   sec-independent protein translocase protein TATC, chloroplastic 
 zma-u.5   100279882   Sec-independent protein translocase protein TATC chloroplastic 
 tae-r.2   123061168   sec-independent protein translocase protein TATC, chloroplastic 
 tae-r.2   123069792   sec-independent protein translocase protein TATC, chloroplastic 
 tae-r.2   123078240   sec-independent protein translocase protein TATC, chloroplastic 
 hvu-r.1   123443622   sec-independent protein translocase protein TATC, chloroplastic 
 sbi-r.1   8056864   sec-independent protein translocase protein TATC, chloroplastic 
 bdi-r.1   100827882   sec-independent protein translocase protein TATC, chloroplastic 
 cre-r.1   CHLRE_03g145887v5   uncharacterized protein 

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Top 50 coexpressed genes to APG2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APG2 (ath-u.5 coexpression data)

CoexMap"814640"


athAPG2 | Entrez gene ID : 814640      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03060 [list] [network] Protein export (62 genes)
GO BP
GO:0009567 [list] [network] double fertilization forming a zygote and endosperm  (45 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO CC
GO:0043235 [list] [network] receptor complex  (2 genes)  IDA  
GO:0033281 [list] [network] TAT protein transport complex  (3 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0042651 [list] [network] thylakoid membrane  (348 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0009977 [list] [network] proton motive force dependent protein transmembrane transporter activity  (2 genes)  ISS  
Protein NP_565252.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  E.R. 1,  E.R._vacu 1  (predict for NP_565252.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_565252.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
APG2
ath-r.7
for
APG2
ath-m.9
for
APG2
ath-e.2
for
APG2
ath-m.4.bio
for
APG2
ath-m.4.hor
for
APG2
ath-m.4.lig
for
APG2
ath-m.4.str
for
APG2
ath-m.4.tis
for
APG2
bra-r.6
for
103832770
bra-r.6
for
103827606
bna-r.1
for
125587734
bna-r.1
for
125594356
bna-r.1
for
106454450
ghi-r.1
for
121210957
ghi-r.1
for
107946217
cit-r.1
for
102619941
gma-u.5
for
100801670
gma-u.5
for
100788116
vvi-u.5
for
100259443
ppo-u.5
for
7475552
mtr-u.5
for
25485444
sly-u.5
for
101263905
sot-r.1
for
102597934
nta-r.1
for
107784471
nta-r.1
for
107777379
osa-u.5
for
4324478
zma-u.5
for
103632985
zma-u.5
for
100279882
tae-r.2
for
123061168
tae-r.2
for
123069792
tae-r.2
for
123078240
hvu-r.1
for
123443622
sbi-r.1
for
8056864
bdi-r.1
for
100827882
cre-r.1
for
CHLRE_03g145887v5


Ortholog ID: 6794
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol APG2 LOC103832770 LOC103827606 LOC125587734 LOC125601280 LOC106381932 LOC121210957 LOC107946217 LOC102619941 LOC100801670 LOC100788116 LOC100259443 LOC7475552 LOC25485444 LOC101263905 LOC102597934 LOC107784471 LOC107777379 LOC4324478 LOC103632985 LOC100279882 LOC123061168 LOC123069792 LOC123078240 LOC123443622 LOC8056864 LOC100827882 CHLRE_03g145887v5
Function* Sec-independent periplasmic protein translocase sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic-like sec-independent protein translocase protein TATC, chloroplastic-like sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent periplasmic protein translocase-like protein sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic-like sec-independent protein translocase protein TATC, chloroplastic-like sec-independent protein translocase protein TATC, chloroplastic Sec-independent protein translocase protein TATC chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic sec-independent protein translocase protein TATC, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03060 Protein export 2
cre00860 Porphyrin metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814640 103832770 103827606 125587734 125601280 106381932 121210957 107946217 102619941 100801670 100788116 100259443 7475552 25485444 101263905 102597934 107784471 107777379 4324478 103632985 100279882 123061168 123069792 123078240 123443622 8056864 100827882 5721240
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