ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	PTR2	peptide transporter 2
ath-r.7	PTR2	peptide transporter 2
ath-m.9	PTR2	peptide transporter 2
ath-e.2	PTR2	peptide transporter 2
ath-m.4.bio	PTR2	peptide transporter 2
ath-m.4.hor	PTR2	peptide transporter 2
ath-m.4.lig	PTR2	peptide transporter 2
ath-m.4.str	PTR2	peptide transporter 2
ath-m.4.tis	PTR2	peptide transporter 2
ath-u.5	PTR4	Major facilitator superfamily protein
ath-u.5	PTR1	peptide transporter 1
ath-u.5	PTR5	peptide transporter 5
gma-u.5	100812743	protein NRT1/ PTR FAMILY 8.3
gma-u.5	100816253	protein NRT1/ PTR FAMILY 8.2
gma-u.5	100804532	protein NRT1/ PTR FAMILY 8.3
vvi-u.5	100262103	protein NRT1/ PTR FAMILY 8.1
vvi-u.5	100255930	protein NRT1/ PTR FAMILY 8.3
ppo-u.5	7462335	protein NRT1/ PTR FAMILY 8.3
mtr-u.5	120577291	protein NRT1/ PTR FAMILY 8.3
mtr-u.5	120577360	protein NRT1/ PTR FAMILY 8.3
mtr-u.5	120577601	protein NRT1/ PTR FAMILY 8.3
sly-u.5	101268606	protein NRT1/ PTR FAMILY 8.1-like
sly-u.5	101254912	protein NRT1/ PTR FAMILY 8.1
sly-u.5	109121034	protein NRT1/ PTR FAMILY 8.1-like
osa-u.5	9272592	protein NRT1/ PTR FAMILY 8.3
osa-u.5	9267831	protein NRT1/ PTR FAMILY 8.3
zma-u.5	103633295	protein NRT1/ PTR FAMILY 8.3
zma-u.5	100280282	Protein NRT1/ PTR FAMILY 8.3
zma-u.5	100216898	Protein NRT1/ PTR FAMILY 8.3

Annotation

functional annotation

KEGG

GO BP

GO:0042938 [list] [network] dipeptide transport	(6 genes)	IDA
GO:0042939 [list] [network] tripeptide transport	(7 genes)	IDA
GO:0015833 [list] [network] peptide transport	(15 genes)	TAS

GO CC

GO:0009705 [list] [network] plant-type vacuole membrane	(117 genes)	IDA
GO:0005774 [list] [network] vacuolar membrane	(164 genes)	HDA
GO:0000325 [list] [network] plant-type vacuole	(788 genes)	HDA
GO:0005773 [list] [network] vacuole	(984 genes)	HDA
GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	HDA

GO MF

GO:0015334 [list] [network] high-affinity oligopeptide transmembrane transporter activity	(1 genes)	IDA
GO:1904680 [list] [network] peptide transmembrane transporter activity	(1 genes)	ISS
GO:0042937 [list] [network] tripeptide transmembrane transporter activity	(4 genes)	IDA
GO:0071916 [list] [network] dipeptide transmembrane transporter activity	(7 genes)	IDA IGI
GO:0015112 [list] [network] nitrate transmembrane transporter activity	(25 genes)	IDA

Protein

NP_178313.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 4

(predict for NP_178313.1)

Subcellular
localization
TargetP

other 8

(predict for NP_178313.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for PTR2	ath-r.7 for PTR2	ath-m.9 for PTR2	ath-e.2 for PTR2	ath-m.4.bio for PTR2	ath-m.4.hor for PTR2	ath-m.4.lig for PTR2	ath-m.4.str for PTR2	ath-m.4.tis for PTR2	ath-u.5 for PTR4	ath-u.5 for PTR1	ath-u.5 for PTR5	gma-u.5 for 100812743	gma-u.5 for 100816253	gma-u.5 for 100804532	vvi-u.5 for 100262103	vvi-u.5 for 100255930	ppo-u.5 for 7462335	mtr-u.5 for 120577291	mtr-u.5 for 120577360	mtr-u.5 for 120577601	sly-u.5 for 101268606	sly-u.5 for 101254912	sly-u.5 for 109121034	osa-u.5 for 9272592	osa-u.5 for 9267831	zma-u.5 for 103633295	zma-u.5 for 100280282	zma-u.5 for 100216898

Ortholog

Ortholog ID: 366

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

sbi

bdi

cre

Symbol

PTR1

PTR6

Function^*

peptide transporter 1

Major facilitator superfamily protein

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1

protein NRT1/ PTR FAMILY 8.1-like

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1

protein NRT1/ PTR FAMILY 8.1-like

protein NRT1/ PTR FAMILY 8.3-like

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1-like

protein NRT1/ PTR FAMILY 8.3

Protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.3

protein NRT1/ PTR FAMILY 8.1-like

protein NRT1/ PTR FAMILY 8.3-like

protein NRT1/ PTR FAMILY 8.3

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00410	beta-Alanine metabolism	2
ath00561	Glycerolipid metabolism	2
ath00770	Pantothenate and CoA biosynthesis	2
ath00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00511	Other glycan degradation	6
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04626	Plant-pathogen interaction	2
ghi00052	Galactose metabolism	2
ghi00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	6
cit00071	Fatty acid degradation	3
cit00350	Tyrosine metabolism	3
cit00592	alpha-Linolenic acid metabolism	3
cit00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi04626	Plant-pathogen interaction	2
vvi04146	Peroxisome	2
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	5
sly01320	Sulfur cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	5
sot04075	Plant hormone signal transduction	4
sot04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	3
zma04070	Phosphatidylinositol signaling system	2
zma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae00220	Arginine biosynthesis	3
tae00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3
sbi04075	Plant hormone signal transduction	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00230	Purine metabolism	4
cre00330	Arginine and proline metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

824581

842516

103872258

103841331

106418484

107932437

121215522

102609697

102611745

100782872

100779289

100255930

100262103

7459085

120577291

120577601

101254912

109121034

102583861

102592324

107786525

107817552

9272592

107276819

100216898

103633295

123098131

123098133

110433833

110436140

100833117

5717895

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to PTR2 (ath-u.5 coexpression data)

Top 50 enrichment test to PTR2 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	12	3	2	1	3	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to PTR2 (ath-u.5 coexpression data)

Top 50 enrichment test to PTR2 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**