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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G04039   DUF2996 family protein 
 ath-r.7   AT2G04039   DUF2996 family protein 
 ath-m.9   AT2G04039   DUF2996 family protein 
 ath-e.2   AT2G04039   DUF2996 family protein 
 ath-m.4.bio   AT2G04039   DUF2996 family protein 
 ath-m.4.hor   AT2G04039   DUF2996 family protein 
 ath-m.4.lig   AT2G04039   DUF2996 family protein 
 ath-m.4.str   AT2G04039   DUF2996 family protein 
 ath-m.4.tis   AT2G04039   DUF2996 family protein 
 bra-r.6   103828550   uncharacterized LOC103828550 
 bna-r.1   125576666   uncharacterized LOC125576666 
 bna-r.1   BNAANNG40350D   uncharacterized BNAANNG40350D 
 ghi-r.1   107923919   uncharacterized LOC107923919 
 ghi-r.1   107954728   uncharacterized LOC107954728 
 ghi-r.1   107912488   uncharacterized LOC107912488 
 cit-r.1   102622730   uncharacterized LOC102622730 
 gma-u.5   100799633   uncharacterized LOC100799633 
 gma-u.5   100305492   uncharacterized LOC100305492 
 vvi-u.5   100852760   uncharacterized LOC100852760 
 mtr-u.5   25500762   uncharacterized LOC25500762 
 sly-u.5   101248905   uncharacterized LOC101248905 
 sot-r.1   102598030   uncharacterized LOC102598030 
 nta-r.1   107809774   uncharacterized LOC107809774 
 nta-r.1   107781661   uncharacterized LOC107781661 
 zma-u.5   100278234   uncharacterized LOC100278234 
 zma-u.5   100275810   Glyceraldehyde-3-phosphate dehydrogenase A 
 tae-r.2   123052127   uncharacterized LOC123052127 
 tae-r.2   123041001   uncharacterized LOC123041001 
 tae-r.2   123185002   uncharacterized LOC123185002 
 hvu-r.1   123425363   uncharacterized LOC123425363 
 sbi-r.1   8060668   uncharacterized LOC8060668 
 bdi-r.1   100846045   uncharacterized LOC100846045 

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Top 50 coexpressed genes to AT2G04039 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G04039 (ath-u.5 coexpression data)

CoexMap"814937"


athAT2G04039 | Entrez gene ID : 814937      
Species ath bra bna ghi cit gma vvi mtr sly sot nta zma tae hvu sbi bdi ppo cre osa
Paralog 9 1 2 3 1 2 1 1 1 1 2 2 3 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009579 [list] [network] thylakoid  (507 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_001077877.1 [sequence] [blastp]
NP_565308.1 [sequence] [blastp]
NP_849933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 3  (predict for NP_001077877.1)
chlo 9  (predict for NP_565308.1)
nucl 4,  cyto 4,  chlo 1  (predict for NP_849933.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001077877.1)
chlo 8  (predict for NP_565308.1)
other 6,  scret 3  (predict for NP_849933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G04039
ath-r.7
for
AT2G04039
ath-m.9
for
AT2G04039
ath-e.2
for
AT2G04039
ath-m.4.bio
for
AT2G04039
ath-m.4.hor
for
AT2G04039
ath-m.4.lig
for
AT2G04039
ath-m.4.str
for
AT2G04039
ath-m.4.tis
for
AT2G04039
bra-r.6
for
103828550
bna-r.1
for
125576666
bna-r.1
for
BNAANNG40350D
ghi-r.1
for
107923919
ghi-r.1
for
107954728
ghi-r.1
for
107912488
cit-r.1
for
102622730
gma-u.5
for
100799633
gma-u.5
for
100305492
vvi-u.5
for
100852760
mtr-u.5
for
25500762
sly-u.5
for
101248905
sot-r.1
for
102598030
nta-r.1
for
107809774
nta-r.1
for
107781661
zma-u.5
for
100278234
zma-u.5
for
100275810
tae-r.2
for
123052127
tae-r.2
for
123041001
tae-r.2
for
123185002
hvu-r.1
for
123425363
sbi-r.1
for
8060668
bdi-r.1
for
100846045


Ortholog ID: 9973
Species ath bra bna bna ghi ghi ghi cit gma gma vvi mtr sly sot nta nta zma zma tae tae tae hvu sbi bdi
Symbol AT2G04039 LOC103828550 LOC125576666 BNAANNG40350D LOC107923919 LOC107954728 LOC107912488 LOC102622730 LOC100799633 LOC100305492 LOC100852760 LOC25500762 LOC101248905 LOC102598030 LOC107809774 LOC107781661 LOC100278234 LOC100275810 LOC123052127 LOC123041001 LOC123185002 LOC123425363 LOC8060668 LOC100846045
Function* DUF2996 family protein uncharacterized LOC103828550 uncharacterized LOC125576666 uncharacterized BNAANNG40350D uncharacterized LOC107923919 uncharacterized LOC107954728 uncharacterized LOC107912488 uncharacterized LOC102622730 uncharacterized LOC100799633 uncharacterized LOC100305492 uncharacterized LOC100852760 uncharacterized LOC25500762 uncharacterized LOC101248905 uncharacterized LOC102598030 uncharacterized LOC107809774 uncharacterized LOC107781661 uncharacterized LOC100278234 Glyceraldehyde-3-phosphate dehydrogenase A uncharacterized LOC123052127 uncharacterized LOC123041001 uncharacterized LOC123185002 uncharacterized LOC123425363 uncharacterized LOC8060668 uncharacterized LOC100846045
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00260 Glycine, serine and threonine metabolism 4
bra01230 Biosynthesis of amino acids 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00910 Nitrogen metabolism 4
ghi00020 Citrate cycle (TCA cycle) 2
ghi00270 Cysteine and methionine metabolism 2
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit00710 Carbon fixation by Calvin cycle 7
cit00010 Glycolysis / Gluconeogenesis 4
cit01230 Biosynthesis of amino acids 4
cit00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00710 Carbon fixation by Calvin cycle 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta04146 Peroxisome 4
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta01200 Carbon metabolism 3
nta04146 Peroxisome 3
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00260 Glycine, serine and threonine metabolism 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 10
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae04146 Peroxisome 6
tae00260 Glycine, serine and threonine metabolism 5
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 10
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae04146 Peroxisome 6
tae00260 Glycine, serine and threonine metabolism 5
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae00260 Glycine, serine and threonine metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae00710 Carbon fixation by Calvin cycle 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi00710 Carbon fixation by Calvin cycle 6
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814937 103828550 125576666 106406311 107923919 107954728 107912488 102622730 100799633 100305492 100852760 25500762 101248905 102598030 107809774 107781661 100278234 100275810 123052127 123041001 123185002 123425363 8060668 100846045
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