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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LpxB   transferases, transferring glycosyl groups 
 ath-r.7   LpxB   transferases, transferring glycosyl groups 
 ath-m.9   LpxB   transferases, transferring glycosyl groups 
 ath-e.2   LpxB   transferases, transferring glycosyl groups 
 ath-m.4.bio   LpxB   transferases, transferring glycosyl groups 
 ath-m.4.hor   LpxB   transferases, transferring glycosyl groups 
 ath-m.4.lig   LpxB   transferases, transferring glycosyl groups 
 ath-m.4.str   LpxB   transferases, transferring glycosyl groups 
 ath-m.4.tis   LpxB   transferases, transferring glycosyl groups 
 bra-r.6   103828530   probable lipid-A-disaccharide synthase, mitochondrial 
 bna-r.1   106357783   probable lipid-A-disaccharide synthase, mitochondrial 
 bna-r.1   106410948   probable lipid-A-disaccharide synthase, mitochondrial 
 ghi-r.1   107955723   probable lipid-A-disaccharide synthase, mitochondrial 
 ghi-r.1   121231802   probable lipid-A-disaccharide synthase, mitochondrial 
 cit-r.1   102607019   probable lipid-A-disaccharide synthase, mitochondrial 
 gma-u.5   100803768   probable lipid-A-disaccharide synthase, mitochondrial 
 vvi-u.5   100255117   probable lipid-A-disaccharide synthase, mitochondrial 
 ppo-u.5   7455967   probable lipid-A-disaccharide synthase, mitochondrial 
 mtr-u.5   25500329   probable lipid-A-disaccharide synthase, mitochondrial 
 sly-u.5   101259762   probable lipid-A-disaccharide synthase, mitochondrial 
 sot-r.1   102585460   probable lipid-A-disaccharide synthase, mitochondrial 
 nta-r.1   107789052   putative lipid-A-disaccharide synthase, mitochondrial 
 nta-r.1   107795892   putative lipid-A-disaccharide synthase, mitochondrial 
 nta-r.1   107764969   putative lipid-A-disaccharide synthase, mitochondrial 
 osa-u.5   4327007   probable lipid-A-disaccharide synthase, mitochondrial 
 zma-u.5   100272521   putative lipid-A-disaccharide synthase mitochondrial 
 tae-r.2   123070798   probable lipid-A-disaccharide synthase, mitochondrial 
 tae-r.2   123062074   probable lipid-A-disaccharide synthase, mitochondrial 
 hvu-r.1   123444425   probable lipid-A-disaccharide synthase, mitochondrial 
 sbi-r.1   8072082   probable lipid-A-disaccharide synthase, mitochondrial 
 bdi-r.1   100841534   probable lipid-A-disaccharide synthase, mitochondrial 

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Top 50 coexpressed genes to LpxB (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LpxB (ath-u.5 coexpression data)

CoexMap"814998"


athLpxB | Entrez gene ID : 814998      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 3 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00540 [list] [network] Lipopolysaccharide biosynthesis (10 genes)
GO BP
GO:2001289 [list] [network] lipid X metabolic process  (10 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA IMP  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008915 [list] [network] lipid-A-disaccharide synthase activity  (1 genes)  IMP  
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISS  
Protein NP_178535.3 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  cyto_mito 3,  chlo 2,  nucl 1  (predict for NP_178535.3)
Subcellular
localization
TargetP
mito 7  (predict for NP_178535.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
LpxB
ath-r.7
for
LpxB
ath-m.9
for
LpxB
ath-e.2
for
LpxB
ath-m.4.bio
for
LpxB
ath-m.4.hor
for
LpxB
ath-m.4.lig
for
LpxB
ath-m.4.str
for
LpxB
ath-m.4.tis
for
LpxB
bra-r.6
for
103828530
bna-r.1
for
106357783
bna-r.1
for
106410948
ghi-r.1
for
107955723
ghi-r.1
for
121231802
cit-r.1
for
102607019
gma-u.5
for
100803768
vvi-u.5
for
100255117
ppo-u.5
for
7455967
mtr-u.5
for
25500329
sly-u.5
for
101259762
sot-r.1
for
102585460
nta-r.1
for
107789052
nta-r.1
for
107795892
nta-r.1
for
107764969
osa-u.5
for
4327007
zma-u.5
for
100272521
tae-r.2
for
123070798
tae-r.2
for
123062074
hvu-r.1
for
123444425
sbi-r.1
for
8072082
bdi-r.1
for
100841534


Ortholog ID: 10645
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae hvu sbi bdi
Symbol LpxB LOC103828530 LOC106357783 LOC106410948 LOC107955723 LOC121231802 LOC102607019 LOC100803768 LOC100255117 LOC7455967 LOC25500329 LOC101259762 LOC102585460 LOC107789052 LOC107795892 LOC107764969 LOC4327007 LOC100272521 LOC123070798 LOC123062074 LOC123444425 LOC8072082 LOC100841534
Function* transferases, transferring glycosyl groups probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial putative lipid-A-disaccharide synthase, mitochondrial putative lipid-A-disaccharide synthase, mitochondrial putative lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial putative lipid-A-disaccharide synthase mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial probable lipid-A-disaccharide synthase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814998 103828530 106357783 106410948 107955723 121231802 102607019 100803768 100255117 7455967 25500329 101259762 102585460 107789052 107795892 107764969 4327007 100272521 123070798 123062074 123444425 8072082 100841534
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