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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-r.7   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.9   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-e.2   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.bio   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.hor   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.lig   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.str   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-m.4.tis   XTH4   xyloglucan endotransglucosylase/hydrolase 4 
 ath-u.5   XTH5   xyloglucan endotransglucosylase/hydrolase 5 
 gma-u.5   100779122   xyloglucan endotransglucosylase/hydrolase protein B-like 
 gma-u.5   100813880   xyloglucan endotransglucosylase/hydrolase protein A-like 
 gma-u.5   100793686   xyloglucan endotransglucosylase/hydrolase protein A-like 
 vvi-u.5   100232906   xyloglucan endotransglucosylase protein 34 
 ppo-u.5   7497570   xyloglucan endotransglucosylase protein 34 
 ppo-u.5   7491445   xyloglucan endotransglucosylase protein 34 
 mtr-u.5   11442445   probable xyloglucan endotransglucosylase/hydrolase protein B 
 mtr-u.5   25495881   xyloglucan endotransglucosylase/hydrolase protein A 
 mtr-u.5   11439526   xyloglucan endotransglucosylase/hydrolase 1 
 sly-u.5   101260989   xyloglucan endotransglucosylase protein 2-like 
 sly-u.5   XTH1   endo-xyloglucan transferase 
 sly-u.5   XET4   xyloglucan endotransglycosylase 
 osa-u.5   4350662   probable xyloglucan endotransglucosylase/hydrolase 
 zma-u.5   100282604   uncharacterized LOC100282604 

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Top 50 coexpressed genes to XTH4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to XTH4 (ath-u.5 coexpression data)

CoexMap"815247"


athXTH4 | Entrez gene ID : 815247      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 3 1 2 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009645 [list] [network] response to low light intensity stimulus  (20 genes)  IEP  
GO:0009612 [list] [network] response to mechanical stimulus  (28 genes)  IEP  
GO:0010089 [list] [network] xylem development  (46 genes)  IGI  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (47 genes)  IGI  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  IDA ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (25 genes)  IMP ISS  
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  ISS  
Protein NP_001325140.1 [sequence] [blastp]
NP_178708.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001325140.1)
chlo 6,  E.R. 1,  nucl 1,  extr 1,  vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_178708.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for NP_001325140.1)
scret 9  (predict for NP_178708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
XTH4
ath-r.7
for
XTH4
ath-m.9
for
XTH4
ath-e.2
for
XTH4
ath-m.4.bio
for
XTH4
ath-m.4.hor
for
XTH4
ath-m.4.lig
for
XTH4
ath-m.4.str
for
XTH4
ath-m.4.tis
for
XTH4
ath-u.5
for
XTH5
gma-u.5
for
100779122
gma-u.5
for
100813880
gma-u.5
for
100793686
vvi-u.5
for
100232906
ppo-u.5
for
7497570
ppo-u.5
for
7491445
mtr-u.5
for
11442445
mtr-u.5
for
25495881
mtr-u.5
for
11439526
sly-u.5
for
101260989
sly-u.5
for
XTH1
sly-u.5
for
XET4
osa-u.5
for
4350662
zma-u.5
for
100282604


Ortholog ID: 3544
Species ath ath bra bna bna ghi ghi cit cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta osa zma tae hvu sbi bdi
Symbol XTH5 XTH4 LOC103860348 LOC106370596 LOC106443103 LOC107911706 LOC107924509 LOC102613907 LOC102617022 LOC100813880 LOC100793686 LOC100232906 LOC7497570 LOC11442445 LOC25495878 XTH1 XET4 LOC102594633 LOC102578319 LOC107768220 LOC107807679 LOC4350662 LOC100282604 LOC123175951 LOC123448295 LOC8064829 LOC100826179
Function* xyloglucan endotransglucosylase/hydrolase 5 xyloglucan endotransglucosylase/hydrolase 4 xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase protein 5 probable xyloglucan endotransglucosylase/hydrolase protein 5 probable xyloglucan endotransglucosylase/hydrolase protein B probable xyloglucan endotransglucosylase/hydrolase protein B xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase/hydrolase protein A-like xyloglucan endotransglucosylase/hydrolase protein A-like xyloglucan endotransglucosylase protein 34 xyloglucan endotransglucosylase protein 34 probable xyloglucan endotransglucosylase/hydrolase protein B xyloglucan endotransglucosylase/hydrolase protein A endo-xyloglucan transferase xyloglucan endotransglycosylase xyloglucan endotransglucosylase/hydrolase protein A-like probable xyloglucan endotransglucosylase/hydrolase protein probable xyloglucan endotransglucosylase/hydrolase protein xyloglucan endotransglucosylase protein 2-like probable xyloglucan endotransglucosylase/hydrolase uncharacterized LOC100282604 probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase probable xyloglucan endotransglucosylase/hydrolase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 4
ppo00562 Inositol phosphate metabolism 2
ppo00564 Glycerophospholipid metabolism 2
ppo00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 8
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04712 Circadian rhythm - plant 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00195 Photosynthesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831233 815247 103860348 106370596 106443103 107911706 107924509 102613907 102617022 100813880 100793686 100232906 7497570 11442445 25495878 544272 543626 102594633 102578319 107768220 107807679 4350662 100282604 123175951 123448295 8064829 100826179
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