ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	AGL44	AGAMOUS-like 44
ath-m.4.bio	AGL44	AGAMOUS-like 44
ath-m.4.hor	AGL44	AGAMOUS-like 44
ath-m.4.lig	AGL44	AGAMOUS-like 44
ath-m.4.str	AGL44	AGAMOUS-like 44
ath-m.4.tis	AGL44	AGAMOUS-like 44
ath-u.5	AGL16	AGAMOUS-like 16
ath-u.5	AGL21	AGAMOUS-like 21
bra-r.6	103847933	MADS-box transcription factor ANR1
bra-r.6	103840485	agamous-like MADS-box protein AGL16
bna-r.1	106359933	agamous-like MADS-box protein AGL21
ghi-r.1	107908410	MADS-box transcription factor 23-like
cit-r.1	102613302	MADS-box transcription factor 23-like
cit-r.1	102630220	MADS-box transcription factor 23-like
gma-u.5	100812413	MADS-box transcription factor 23
gma-u.5	100808145	MADS-box transcription factor 23
ppo-u.5	7461842	MADS-box transcription factor 23
mtr-u.5	11423803	MADS-box transcription factor 23
mtr-u.5	11407839	agamous-like MADS-box protein AGL21
mtr-u.5	11418839	MADS-box transcription factor 23
sot-r.1	102593715	MADS-box transcription factor 23-like
sot-r.1	102591829	MADS-box transcription factor 23
sot-r.1	102582884	MADS-box transcription factor 23-like
nta-r.1	107798569	MADS-box transcription factor 23
nta-r.1	107811079	MADS-box transcription factor 23-like
osa-u.5	4329771	MADS-box transcription factor 27-like
osa-u.5	4330621	MADS-box transcription factor 57-like
osa-u.5	4335427	MADS-box transcription factor 25-like
zma-u.5	103646360	MADS-box transcription factor 27
zma-u.5	103643284	MADS-box transcription factor 23
sbi-r.1	8057478	MADS-box transcription factor 27
bdi-r.1	100840222	MADS-box transcription factor 57-like
bdi-r.1	100823221	MADS-box transcription factor 27

Annotation

functional annotation

KEGG

GO BP

GO:0071249 [list] [network] cellular response to nitrate	(7 genes)	IEP
GO:0007584 [list] [network] response to nutrient	(14 genes)	IMP
GO:0010167 [list] [network] response to nitrate	(31 genes)	IMP
GO:0048527 [list] [network] lateral root development	(131 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_001324071.1 [sequence] [blastp]
NP_179033.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for NP_001324071.1)
nucl 9	(predict for NP_179033.1)

Subcellular
localization
TargetP

other 7, mito 4	(predict for NP_001324071.1)
other 7, mito 4	(predict for NP_179033.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AGL44	ath-m.4.bio for AGL44	ath-m.4.hor for AGL44	ath-m.4.lig for AGL44	ath-m.4.str for AGL44	ath-m.4.tis for AGL44	ath-u.5 for AGL16	ath-u.5 for AGL21	bra-r.6 for 103847933	bra-r.6 for 103840485	bna-r.1 for 106359933	ghi-r.1 for 107908410	cit-r.1 for 102613302	cit-r.1 for 102630220	gma-u.5 for 100812413	gma-u.5 for 100808145	ppo-u.5 for 7461842	mtr-u.5 for 11423803	mtr-u.5 for 11407839	mtr-u.5 for 11418839	sot-r.1 for 102593715	sot-r.1 for 102591829	sot-r.1 for 102582884	nta-r.1 for 107798569	nta-r.1 for 107811079	osa-u.5 for 4329771	osa-u.5 for 4330621	osa-u.5 for 4335427	zma-u.5 for 103646360	zma-u.5 for 103643284	sbi-r.1 for 8057478	bdi-r.1 for 100840222	bdi-r.1 for 100823221

Ortholog

Ortholog ID: 554

Species

ath

bra

bna

ghi

cit

gma

ppo

mtr

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

AGL16

Function^*

AGAMOUS-like 16

agamous-like MADS-box protein AGL21

agamous-like MADS-box protein AGL16

agamous-like MADS-box protein AGL21