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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ACO1   ACC oxidase 1 
 ath-r.7   ACO1   ACC oxidase 1 
 ath-m.9   ACO1   ACC oxidase 1 
 ath-e.2   ACO1   ACC oxidase 1 
 ath-m.4.bio   ACO1   ACC oxidase 1 
 ath-m.4.hor   ACO1   ACC oxidase 1 
 ath-m.4.lig   ACO1   ACC oxidase 1 
 ath-m.4.str   ACO1   ACC oxidase 1 
 ath-m.4.tis   ACO1   ACC oxidase 1 
 gma-u.5   100794816   1-aminocyclopropane-1-carboxylate oxidase 1 
 gma-u.5   100793294   1-aminocyclopropane-1-carboxylate oxidase 1 
 gma-u.5   100785514   1-aminocyclopropane-1-carboxylate oxidase 1 
 ppo-u.5   7497621   1-aminocyclopropane-1-carboxylate oxidase 1 
 mtr-u.5   11435929   1-aminocyclopropane-1-carboxylate oxidase 1 
 sly-u.5   ACO5   1-aminocyclopropane-1-carboxylate oxidase 

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Top 50 coexpressed genes to ACO1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ACO1 (ath-u.5 coexpression data)

CoexMap"816478"


athACO1 | Entrez gene ID : 816478      
Species ath gma ppo mtr sly tae osa hvu zma ghi bdi cit vvi bra cre sbi bna nta sot
Paralog 9 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (125 genes)
GO BP
GO:0071732 [list] [network] cellular response to nitric oxide  (4 genes)  IEP  
GO:0051365 [list] [network] cellular response to potassium ion starvation  (8 genes)  IEP  
GO:0009693 [list] [network] ethylene biosynthetic process  (22 genes)  NAS  
GO:0071398 [list] [network] cellular response to fatty acid  (82 genes)  IEP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0009815 [list] [network] 1-aminocyclopropane-1-carboxylate oxidase activity  (12 genes)  IEA  
Protein NP_001324863.1 [sequence] [blastp]
NP_179549.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_plas 2,  nucl 1,  pero 1,  chlo_mito 1  (predict for NP_001324863.1)
cyto 5,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_179549.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001324863.1)
other 8  (predict for NP_179549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ACO1

.
ath-r.7
for
ACO1

.
ath-m.9
for
ACO1

.
ath-e.2
for
ACO1

.
ath-m.4.bio
for
ACO1

.
ath-m.4.hor
for
ACO1

.
ath-m.4.lig
for
ACO1

.
ath-m.4.str
for
ACO1

.
ath-m.4.tis
for
ACO1

.
gma-u.5
for
100794816

.
gma-u.5
for
100793294

.
gma-u.5
for
100785514

.
ppo-u.5
for
7497621

.
mtr-u.5
for
11435929

.
sly-u.5
for
ACO5

.


Ortholog ID: 7156
Species ath gma gma sly bra ppo mtr ghi ghi bna bna sot cit nta nta
Symbol ACO1 LOC100785514 LOC100794816 ACO5 LOC103842633 LOC7497621 LOC11435929 LOC121231941 LOC107932273 LOC106376208 LOC106400855 LOC102577542 LOC102609002 LOC107790081 LOC107765010
Function* ACC oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1 ACC oxidase 1-aminocyclopropane-1-carboxylate oxidase 1 1-aminocyclopropane-1-carboxylate oxidase 1-like 1-aminocyclopropane-1-carboxylate oxidase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 3
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 4
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
sly00270 Cysteine and methionine metabolism 2
sly00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra00073 Cutin, suberine and wax biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 5
mtr00620 Pyruvate metabolism 4
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 9
ghi00071 Fatty acid degradation 8
ghi00350 Tyrosine metabolism 8
ghi00592 alpha-Linolenic acid metabolism 8
ghi00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 9
ghi00071 Fatty acid degradation 8
ghi00350 Tyrosine metabolism 8
ghi00592 alpha-Linolenic acid metabolism 8
ghi00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta00270 Cysteine and methionine metabolism 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta04016 MAPK signaling pathway - plant 4
nta04626 Plant-pathogen interaction 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816478 100785514 100794816 543800 103842633 7497621 11435929 121231941 107932273 106376208 106400855 102577542 102609002 107790081 107765010
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