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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HBT   CDC27 family protein 
 ath-r.7   HBT   CDC27 family protein 
 ath-m.9   HBT   CDC27 family protein 
 ath-e.2   HBT   CDC27 family protein 
 ath-m.4.bio   HBT   CDC27 family protein 
 ath-m.4.hor   HBT   CDC27 family protein 
 ath-m.4.lig   HBT   CDC27 family protein 
 ath-m.4.str   HBT   CDC27 family protein 
 ath-m.4.tis   HBT   CDC27 family protein 
 ath-u.5   CDC27a   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100813971   cell division cycle protein 27 homolog B 
 gma-u.5   100804373   cell division cycle protein 27 homolog B 
 gma-u.5   100802544   cell division cycle protein 27 homolog B 
 vvi-u.5   100256135   cell division cycle protein 27 homolog B 
 ppo-u.5   7461308   cell division cycle protein 27 homolog B 
 ppo-u.5   18100455   cell division cycle protein 27 homolog B 
 ppo-u.5   7461553   cell division cycle protein 27 homolog B 
 mtr-u.5   25495529   cell division cycle protein 27 homolog B 
 mtr-u.5   25497685   cell division cycle protein 27 homolog B 
 sly-u.5   101260701   cell division cycle protein 27 homolog B 
 osa-u.5   4341553   cell division cycle protein 27 homolog B 
 zma-u.5   100192791   uncharacterized LOC100192791 

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Top 50 coexpressed genes to HBT (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HBT (ath-u.5 coexpression data)

CoexMap"816519"


athHBT | Entrez gene ID : 816519      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 10 3 1 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO:0010071 [list] [network] root meristem specification  (6 genes)  IMP  
GO:0048829 [list] [network] root cap development  (15 genes)  IMP  
GO:0007346 [list] [network] regulation of mitotic cell cycle  (32 genes)  IMP TAS  
GO:0051302 [list] [network] regulation of cell division  (78 genes)  IGI  
GO:0007276 [list] [network] gamete generation  (80 genes)  IGI  
GO:0051510 [list] [network] regulation of unidimensional cell growth  (82 genes)  IGI  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (627 genes)  IMP  
GO CC
GO:0005680 [list] [network] anaphase-promoting complex  (6 genes)  IPI ISS TAS  
GO:0009504 [list] [network] cell plate  (43 genes)  IDA  
GO:0005819 [list] [network] spindle  (58 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323708.1 [sequence] [blastp]
NP_849994.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_001323708.1)
cyto 4,  nucl 4,  cysk 1  (predict for NP_849994.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001323708.1)
other 5  (predict for NP_849994.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HBT

.
ath-r.7
for
HBT

.
ath-m.9
for
HBT

.
ath-e.2
for
HBT

.
ath-m.4.bio
for
HBT

.
ath-m.4.hor
for
HBT

.
ath-m.4.lig
for
HBT

.
ath-m.4.str
for
HBT

.
ath-m.4.tis
for
HBT

.
ath-u.5
for
CDC27a

.
gma-u.5
for
100813971

.
gma-u.5
for
100804373

.
gma-u.5
for
100802544

.
vvi-u.5
for
100256135

.
ppo-u.5
for
7461308

.
ppo-u.5
for
18100455

.
ppo-u.5
for
7461553

.
mtr-u.5
for
25495529

.
mtr-u.5
for
25497685

.
sly-u.5
for
101260701

.
osa-u.5
for
4341553

.
zma-u.5
for
100192791

.


Ortholog ID: 5061
Species ath ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi cre sbi sot sot cit bdi nta nta
Symbol HBT CDC27a LOC100804373 LOC100813971 LOC101260701 LOC4341553 LOC100192791 LOC103828263 LOC100256135 LOC7461553 LOC7461308 LOC25497685 LOC25495529 LOC123155809 LOC123148430 LOC123406944 LOC107950620 LOC107951913 CHLRE_17g740510v5 LOC8078673 LOC102602679 LOC102593482 LOC102613440 LOC100823965 LOC107825224 LOC107812538
Function* CDC27 family protein Tetratricopeptide repeat (TPR)-like superfamily protein cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B uncharacterized LOC100192791 cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B uncharacterized protein cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B-like cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B cell division cycle protein 27 homolog B-like cell division cycle protein 27 homolog B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 2
ath04814 Motor proteins 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03420 Nucleotide excision repair 3
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03250 Viral life cycle - HIV-1 2
gma04120 Ubiquitin mediated proteolysis 2
gma00510 N-Glycan biosynthesis 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 3
sly03420 Nucleotide excision repair 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03040 Spliceosome 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03015 mRNA surveillance pathway 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta04016 MAPK signaling pathway - plant 2
nta00310 Lysine degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta04016 MAPK signaling pathway - plant 2
nta00310 Lysine degradation 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816519 820879 100804373 100813971 101260701 4341553 100192791 103828263 100256135 7461553 7461308 25497685 25495529 123155809 123148430 123406944 107950620 107951913 5726646 8078673 102602679 102593482 102613440 100823965 107825224 107812538
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