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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT2G20330   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100815380   WD repeat-containing protein 70 
 vvi-u.5   100256585   uncharacterized LOC100256585 
 ppo-u.5   7464411   uncharacterized LOC7464411 
 mtr-u.5   11444777   WD repeat-containing protein 70 
 sly-u.5   101261821   uncharacterized LOC101261821 
 osa-u.5   4348832   uncharacterized LOC4348832 
 zma-u.5   100280725   nucleotide binding protein 

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Top 50 coexpressed genes to AT2G20330 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G20330 (ath-u.5 coexpression data)

CoexMap"816552"


athAT2G20330 | Entrez gene ID : 816552      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  IPI ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_179623.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_179623.1)
Subcellular
localization
TargetP
other 6  (predict for NP_179623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G20330

.
ath-r.7
for
AT2G20330

.
ath-m.9
for
AT2G20330

.
ath-e.2
for
AT2G20330

.
ath-m.4.bio
for
AT2G20330

.
ath-m.4.hor
for
AT2G20330

.
ath-m.4.lig
for
AT2G20330

.
ath-m.4.str
for
AT2G20330

.
ath-m.4.tis
for
AT2G20330

.
gma-u.5
for
100815380

.
vvi-u.5
for
100256585

.
ppo-u.5
for
7464411

.
mtr-u.5
for
11444777

.
sly-u.5
for
101261821

.
osa-u.5
for
4348832

.
zma-u.5
for
100280725

.


Ortholog ID: 10663
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G20330 LOC100815380 LOC101261821 LOC4348832 LOC100280725 LOC103828184 LOC100256585 LOC7464411 LOC11444777 LOC123120153 LOC123044908 LOC123430382 LOC107925873 LOC107955419 LOC106357571 LOC106387345 CHLRE_04g217750v5 LOC8070513 LOC102585575 LOC102609202 LOC100827594 LOC107829585 LOC142171499
Function* Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 70 uncharacterized LOC101261821 uncharacterized LOC4348832 nucleotide binding protein WD repeat-containing protein 70 uncharacterized LOC100256585 uncharacterized LOC7464411 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 WD repeat-containing protein 70 uncharacterized protein WD repeat-containing protein 70 WD repeat-containing protein 70 uncharacterized LOC102609202 WD repeat-containing protein 70 uncharacterized LOC107829585 uncharacterized LOC142171499
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00052 Galactose metabolism 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816552 100815380 101261821 4348832 100280725 103828184 100256585 7464411 11444777 123120153 123044908 123430382 107925873 107955419 106357571 106387345 5721733 8070513 102585575 102609202 100827594 107829585 142171499
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