ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	AT2G20480	uncharacterized protein
ath-m.4.bio	AT2G20480	uncharacterized protein
ath-m.4.hor	AT2G20480	uncharacterized protein
ath-m.4.lig	AT2G20480	uncharacterized protein
ath-m.4.str	AT2G20480	uncharacterized protein
ath-m.4.tis	AT2G20480	uncharacterized protein
bra-r.6	103828174	uncharacterized LOC103828174
bna-r.1	106380699	uncharacterized LOC106380699
bna-r.1	BNAA07G00330D	uncharacterized BNAA07G00330D
ghi-r.1	121202856	uncharacterized LOC121202856
cit-r.1	102618887	uncharacterized LOC102618887
gma-u.5	113000161	uncharacterized LOC113000161
gma-u.5	100527011	uncharacterized LOC100527011
ppo-u.5	7455745	uncharacterized LOC7455745
sly-u.5	101253610	uncharacterized LOC101253610
sot-r.1	102598830	uncharacterized LOC102598830
osa-u.5	4347200	uncharacterized LOC4347200
tae-r.2	123051211	uncharacterized LOC123051211
hvu-r.1	123424552	uncharacterized LOC123424552
sbi-r.1	8081015	uncharacterized LOC8081015
bdi-r.1	100827793	counting factor 45-1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_179638.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, chlo 1, nucl 1, extr 1

(predict for NP_179638.1)

Subcellular
localization
TargetP

other 4, chlo 4

(predict for NP_179638.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT2G20480	ath-m.4.bio for AT2G20480	ath-m.4.hor for AT2G20480	ath-m.4.lig for AT2G20480	ath-m.4.str for AT2G20480	ath-m.4.tis for AT2G20480	bra-r.6 for 103828174	bna-r.1 for 106380699	bna-r.1 for BNAA07G00330D	ghi-r.1 for 121202856	cit-r.1 for 102618887	gma-u.5 for 113000161	gma-u.5 for 100527011	ppo-u.5 for 7455745	sly-u.5 for 101253610	sot-r.1 for 102598830	osa-u.5 for 4347200	tae-r.2 for 123051211	hvu-r.1 for 123424552	sbi-r.1 for 8081015	bdi-r.1 for 100827793

Ortholog

Ortholog ID: 12883

Species

bra

bna

ghi

cit

gma

ppo

sly

sot

osa

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC103828174

uncharacterized LOC106380699

uncharacterized BNAA07G00330D

uncharacterized LOC121202856

uncharacterized LOC102618887

uncharacterized LOC113000161

uncharacterized LOC100527011

uncharacterized LOC7455745

uncharacterized LOC101253610

uncharacterized LOC102598830

uncharacterized LOC4347200

uncharacterized LOC123051211

uncharacterized LOC123424552

uncharacterized LOC8081015

counting factor 45-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	3
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	9
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma04626	Plant-pathogen interaction	2
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00230	Purine metabolism	2
sot00240	Pyrimidine metabolism	2
sot00480	Glutathione metabolism	2
sot01232	Nucleotide metabolism	2
sot03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa00020	Citrate cycle (TCA cycle)	2
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	6
bdi03060	Protein export	3
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

103828174

106380699

106357561

121202856

102618887

113000161

100527011

7455745

101253610

102598830

4347200

123051211

123424552

8081015

100827793

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G20480 (ath-m.9 coexpression data)

Top 50 enrichment test to AT2G20480 (ath-m.9 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	ppo	sly	sot	osa	tae	hvu	sbi	bdi	mtr	vvi	zma	cre	nta
Paralog	6	1	2	1	1	2	1	1	1	1	1	1	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G20480 (ath-m.9 coexpression data)

Top 50 enrichment test to AT2G20480 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**