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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-r.7   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.9   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-e.2   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.4.str   EMB2219   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   EMB2219   Mitochondrial transcription termination factor family protein 
 gma-u.5   100813633   mTERF domain-containing protein 
 vvi-u.5   100852464   transcription termination factor MTERF2, chloroplastic 
 ppo-u.5   7456374   transcription termination factor MTERF2, chloroplastic 
 mtr-u.5   11417137   transcription termination factor MTERF2, chloroplastic 
 sly-u.5   101250346   transcription termination factor MTERF2, chloroplastic 
 osa-u.5   4342349   transcription termination factor MTERF2, chloroplastic 
 zma-u.5   100285805   uncharacterized LOC100285805 

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Top 50 coexpressed genes to EMB2219 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB2219 (ath-u.5 coexpression data)

CoexMap"816708"


athEMB2219 | Entrez gene ID : 816708      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
Protein NP_001323714.1 [sequence] [blastp]
NP_001323715.1 [sequence] [blastp]
NP_179763.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto 1,  plas 1,  pero 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001323714.1)
chlo 5,  mito 1,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  pero 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001323715.1)
chlo 5,  mito 1,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  pero 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  cyto_pero 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_179763.3)
Subcellular
localization
TargetP
other 2  (predict for NP_001323714.1)
other 2  (predict for NP_001323715.1)
other 2  (predict for NP_179763.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
EMB2219

.
ath-r.7
for
EMB2219

.
ath-m.9
for
EMB2219

.
ath-e.2
for
EMB2219

.
ath-m.4.bio
for
EMB2219

.
ath-m.4.hor
for
EMB2219

.
ath-m.4.lig
for
EMB2219

.
ath-m.4.str
for
EMB2219

.
ath-m.4.tis
for
EMB2219

.
gma-u.5
for
100813633

.
vvi-u.5
for
100852464

.
ppo-u.5
for
7456374

.
mtr-u.5
for
11417137

.
sly-u.5
for
101250346

.
osa-u.5
for
4342349

.
zma-u.5
for
100285805

.


Ortholog ID: 11653
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB2219 LOC100813633 LOC101250346 LOC4342349 LOC100285805 LOC103842500 LOC100852464 LOC7456374 LOC11417137 LOC123052892 LOC123044979 LOC123426299 LOC107952137 LOC107920159 LOC106365962 LOC106415122 LOC8086386 LOC102586135 LOC102629419 LOC100824727 LOC107814721 LOC107789990
Function* Mitochondrial transcription termination factor family protein mTERF domain-containing protein transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic uncharacterized LOC100285805 transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic uncharacterized LOC102586135 transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00500 Starch and sucrose metabolism 2
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816708 100813633 101250346 4342349 100285805 103842500 100852464 7456374 11417137 123052892 123044979 123426299 107952137 107920159 106365962 106415122 8086386 102586135 102629419 100824727 107814721 107789990
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