ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-r.7	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.9	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-e.2	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.4.bio	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.4.hor	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.4.lig	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.4.str	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-m.4.tis	AT2G22900	Galactosyl transferase GMA12/MNN10 family protein
ath-u.5	AT4G37690	Galactosyl transferase GMA12/MNN10 family protein
bra-r.6	103842450	putative glycosyltransferase 7
bra-r.6	103862573	glycosyltransferase 6
bna-r.1	106371340	putative glycosyltransferase 7
bna-r.1	106416005	putative glycosyltransferase 7
bna-r.1	106429412	xyloglucan 6-xylosyltransferase 1-like
ghi-r.1	121215391	xyloglucan 6-xylosyltransferase 2
ghi-r.1	121203559	putative glycosyltransferase 7
ghi-r.1	107945466	putative glycosyltransferase 7
cit-r.1	102628669	putative glycosyltransferase 7
gma-u.5	100820190	galactomannan galactosyltransferase 1
gma-u.5	100778769	galactomannan galactosyltransferase 1
vvi-u.5	100257658	galactomannan galactosyltransferase 1
ppo-u.5	112324182	putative glycosyltransferase 7
ppo-u.5	7465559	putative glycosyltransferase 7
mtr-u.5	11430993	galactomannan galactosyltransferase 1
sly-u.5	101266283	glycosyltransferase 6-like
sly-u.5	101265691	putative glycosyltransferase 7
sly-u.5	101264495	putative glycosyltransferase 7
sot-r.1	102588436	putative glycosyltransferase 7
sot-r.1	102588764	putative glycosyltransferase 7
nta-r.1	107764363	glycosyltransferase 6-like
nta-r.1	107769812	putative glycosyltransferase 7
nta-r.1	107774207	glycosyltransferase 6-like
osa-u.5	4350696	probable glycosyltransferase 6
osa-u.5	4330569	probable glycosyltransferase 7
zma-u.5	103654389	probable glycosyltransferase 6
zma-u.5	542057	alpha-6-galactosyltransferase
zma-u.5	103654388	probable glycosyltransferase 6
tae-r.2	123141726	probable glycosyltransferase 7
tae-r.2	123089817	probable glycosyltransferase 6
tae-r.2	123099234	probable glycosyltransferase 6
hvu-r.1	123428989	probable glycosyltransferase 6
hvu-r.1	123450037	probable glycosyltransferase 6
bdi-r.1	100832484	probable glycosyltransferase 6

Top 50 coexpressed genes to AT2G22900 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT2G22900 (ath-u.5 coexpression data)

CoexMap"816821"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010392 [list] [network] galactoglucomannan metabolic process	(1 genes)	IMP
GO:0051070 [list] [network] galactomannan biosynthetic process	(1 genes)	IMP
GO:0010192 [list] [network] mucilage biosynthetic process	(35 genes)	IMP
GO:0010214 [list] [network] seed coat development	(51 genes)	IEP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(279 genes)	HDA
GO:0005768 [list] [network] endosome	(359 genes)	HDA
GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	HDA IDA ISM

GO MF

GO:0008378 [list] [network] galactosyltransferase activity	(37 genes)	IMP
GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI

Protein

NP_565544.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2

(predict for NP_565544.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for NP_565544.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G22900	ath-r.7 for AT2G22900	ath-m.9 for AT2G22900	ath-e.2 for AT2G22900	ath-m.4.bio for AT2G22900	ath-m.4.hor for AT2G22900	ath-m.4.lig for AT2G22900	ath-m.4.str for AT2G22900	ath-m.4.tis for AT2G22900	ath-u.5 for AT4G37690	bra-r.6 for 103842450	bra-r.6 for 103862573	bna-r.1 for 106371340	bna-r.1 for 106416005	bna-r.1 for 106429412	ghi-r.1 for 121215391	ghi-r.1 for 121203559	ghi-r.1 for 107945466	cit-r.1 for 102628669	gma-u.5 for 100820190	gma-u.5 for 100778769	vvi-u.5 for 100257658	ppo-u.5 for 112324182	ppo-u.5 for 7465559	mtr-u.5 for 11430993	sly-u.5 for 101266283	sly-u.5 for 101265691	sly-u.5 for 101264495	sot-r.1 for 102588436	sot-r.1 for 102588764	nta-r.1 for 107764363	nta-r.1 for 107769812	nta-r.1 for 107774207	osa-u.5 for 4350696	osa-u.5 for 4330569	zma-u.5 for 103654389	zma-u.5 for 542057	zma-u.5 for 103654388	tae-r.2 for 123141726	tae-r.2 for 123089817	tae-r.2 for 123099234	hvu-r.1 for 123428989	hvu-r.1 for 123450037	bdi-r.1 for 100832484

Ortholog

Ortholog ID: 2387

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

bdi

Symbol

Function^*

Galactosyl transferase GMA12/MNN10 family protein