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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G27280   coiled-coil protein (DUF2040) 
 ath-m.4.bio   AT2G27280   coiled-coil protein (DUF2040) 
 ath-m.4.hor   AT2G27280   coiled-coil protein (DUF2040) 
 ath-m.4.lig   AT2G27280   coiled-coil protein (DUF2040) 
 ath-m.4.str   AT2G27280   coiled-coil protein (DUF2040) 
 ath-m.4.tis   AT2G27280   coiled-coil protein (DUF2040) 
 ath-u.5   AT2G27285   nuclear speckle splicing regulatory-like protein (DUF2040) 
 bra-r.6   103864772   nuclear speckle splicing regulatory protein 1 
 bna-r.1   106424341   nuclear speckle splicing regulatory protein 1 
 bna-r.1   106446758   nuclear speckle splicing regulatory protein 1 
 ghi-r.1   107954115   nuclear speckle splicing regulatory protein 1 
 ghi-r.1   107953160   nuclear speckle splicing regulatory protein 1 
 ghi-r.1   107902778   nuclear speckle splicing regulatory protein 1 
 cit-r.1   102606659   uncharacterized LOC102606659 
 gma-u.5   100809279   nuclear speckle splicing regulatory protein 1 
 gma-u.5   100776722   nuclear speckle splicing regulatory protein 1-like 
 vvi-u.5   100241506   nuclear speckle splicing regulatory protein 1-like 
 ppo-u.5   7474913   uncharacterized LOC7474913 
 mtr-u.5   11442499   nuclear speckle splicing regulatory protein 1 
 sly-u.5   101245227   uncharacterized LOC101245227 
 sot-r.1   102592648   nuclear speckle splicing regulatory protein 1-like 
 nta-r.1   107794648   uncharacterized LOC107794648 
 nta-r.1   107765922   uncharacterized LOC107765922 
 osa-u.5   4335927   uncharacterized LOC4335927 
 zma-u.5   100282954   uncharacterized LOC100282954 
 tae-r.2   123189287   nuclear speckle splicing regulatory protein 1 
 tae-r.2   123053377   nuclear speckle splicing regulatory protein 1 
 tae-r.2   123045533   nuclear speckle splicing regulatory protein 1 
 hvu-r.1   123426788   nuclear speckle splicing regulatory protein 1-like 
 sbi-r.1   8080327   nuclear speckle splicing regulatory protein 1 
 bdi-r.1   100844521   nuclear speckle splicing regulatory protein 1 
 cre-r.1   CHLRE_17g734000v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G27280 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G27280 (ath-m.9 coexpression data)

CoexMap"817270"


athAT2G27280 | Entrez gene ID : 817270      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 7 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (8 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_565643.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_565643.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_565643.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G27280
ath-m.4.bio
for
AT2G27280
ath-m.4.hor
for
AT2G27280
ath-m.4.lig
for
AT2G27280
ath-m.4.str
for
AT2G27280
ath-m.4.tis
for
AT2G27280
ath-u.5
for
AT2G27285
bra-r.6
for
103864772
bna-r.1
for
106424341
bna-r.1
for
106446758
ghi-r.1
for
107954115
ghi-r.1
for
107953160
ghi-r.1
for
107902778
cit-r.1
for
102606659
gma-u.5
for
100809279
gma-u.5
for
100776722
vvi-u.5
for
100241506
ppo-u.5
for
7474913
mtr-u.5
for
11442499
sly-u.5
for
101245227
sot-r.1
for
102592648
nta-r.1
for
107794648
nta-r.1
for
107765922
osa-u.5
for
4335927
zma-u.5
for
100282954
tae-r.2
for
123189287
tae-r.2
for
123053377
tae-r.2
for
123045533
hvu-r.1
for
123426788
sbi-r.1
for
8080327
bdi-r.1
for
100844521
cre-r.1
for
CHLRE_17g734000v5


Ortholog ID: 7517
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT2G27285 LOC103864772 LOC106424341 LOC106446758 LOC107954115 LOC107953160 LOC107902778 LOC102606659 LOC100809279 LOC100776722 LOC100241506 LOC7474913 LOC11442499 LOC101245227 LOC102592648 LOC107794648 LOC107765922 LOC4335927 LOC100282954 LOC123189287 LOC123053377 LOC123045533 LOC123426788 LOC8080327 LOC100844521 CHLRE_17g734000v5
Function* nuclear speckle splicing regulatory-like protein (DUF2040) nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 uncharacterized LOC102606659 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1-like nuclear speckle splicing regulatory protein 1-like uncharacterized LOC7474913 nuclear speckle splicing regulatory protein 1 uncharacterized LOC101245227 nuclear speckle splicing regulatory protein 1-like uncharacterized LOC107794648 uncharacterized LOC107765922 uncharacterized LOC4335927 uncharacterized LOC100282954 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1-like nuclear speckle splicing regulatory protein 1 nuclear speckle splicing regulatory protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03050 Proteasome 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817271 103864772 106424341 106446758 107954115 107953160 107902778 102606659 100809279 100776722 100241506 7474913 11442499 101245227 102592648 107794648 107765922 4335927 100282954 123189287 123053377 123045533 123426788 8080327 100844521 66057105
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