Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CKS1   cyclin-dependent kinase-subunit 1 
 ath-r.7   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.9   CKS1   cyclin-dependent kinase-subunit 1 
 ath-e.2   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.4.bio   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.4.hor   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.4.lig   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.4.str   CKS1   cyclin-dependent kinase-subunit 1 
 ath-m.4.tis   CKS1   cyclin-dependent kinase-subunit 1 
 ath-u.5   CKS2   CDK-subunit 2 
 bra-r.6   103864814   cyclin-dependent kinases regulatory subunit 2 
 bra-r.6   103834427   cyclin-dependent kinases regulatory subunit 1 
 bna-r.1   106380659   cyclin-dependent kinases regulatory subunit 1 
 bna-r.1   106394808   cyclin-dependent kinases regulatory subunit 2 
 bna-r.1   106361062   cyclin-dependent kinases regulatory subunit 1 
 ghi-r.1   107912981   cyclin-dependent kinases regulatory subunit 1 
 ghi-r.1   107906642   cyclin-dependent kinases regulatory subunit 1 
 ghi-r.1   107959398   cyclin-dependent kinases regulatory subunit 1 
 cit-r.1   102624930   cyclin-dependent kinases regulatory subunit 1 
 gma-u.5   547737   cyclin-dependent kinases regulatory subunit 
 gma-u.5   100786340   cyclin-dependent kinases regulatory subunit 1 
 vvi-u.5   100261930   cyclin-dependent kinases regulatory subunit 1 
 ppo-u.5   18101948   cyclin-dependent kinases regulatory subunit 1 
 ppo-u.5   18098260   cyclin-dependent kinases regulatory subunit 1 
 mtr-u.5   11418778   cyclin-dependent kinases regulatory subunit 1 
 sly-u.5   101264091   cyclin-dependent kinases regulatory subunit 1 
 sot-r.1   107059432   cyclin-dependent kinases regulatory subunit 1 
 sot-r.1   102580187   cyclin-dependent kinases regulatory subunit 1-like 
 sot-r.1   102592569   cyclin-dependent kinases regulatory subunit 1-like 
 nta-r.1   107813910   cyclin-dependent kinases regulatory subunit 1 
 nta-r.1   107797338   cyclin-dependent kinases regulatory subunit 1 
 osa-u.5   4331610   cyclin-dependent kinases regulatory subunit 1-like 
 zma-u.5   109945322   cyclin-dependent kinases regulatory subunit 1-like 
 zma-u.5   103626749   cyclin-dependent kinases regulatory subunit 1 
 zma-u.5   103644578   cyclin-dependent kinases regulatory subunit 2-like 
 tae-r.2   123083123   cyclin-dependent kinases regulatory subunit 1 
 tae-r.2   123098771   cyclin-dependent kinases regulatory subunit 1 
 tae-r.2   543041   cyclin-dependent kinases regulatory subunit 1 
 hvu-r.1   123449698   cyclin-dependent kinases regulatory subunit 1 
 sbi-r.1   8080563   cyclin-dependent kinases regulatory subunit 1 
 bdi-r.1   100840494   cyclin-dependent kinases regulatory subunit 1 
 cre-r.1   CHLRE_03g180350v5   uncharacterized protein 

close


Top 50 coexpressed genes to CKS1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CKS1 (ath-u.5 coexpression data)

CoexMap"817340"


athCKS1 | Entrez gene ID : 817340      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 2 1 2 1 1 3 2 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042023 [list] [network] DNA endoreduplication  (21 genes)  IDA IMP  
GO:0000278 [list] [network] mitotic cell cycle  (76 genes)  IDA  
GO:0051726 [list] [network] regulation of cell cycle  (135 genes)  IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (313 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (11 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_180363.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_E.R. 3,  extr 2,  chlo 1,  nucl 1  (predict for NP_180363.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_180363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CKS1
ath-r.7
for
CKS1
ath-m.9
for
CKS1
ath-e.2
for
CKS1
ath-m.4.bio
for
CKS1
ath-m.4.hor
for
CKS1
ath-m.4.lig
for
CKS1
ath-m.4.str
for
CKS1
ath-m.4.tis
for
CKS1
ath-u.5
for
CKS2
bra-r.6
for
103864814
bra-r.6
for
103834427
bna-r.1
for
106380659
bna-r.1
for
106394808
bna-r.1
for
106361062
ghi-r.1
for
107912981
ghi-r.1
for
107906642
ghi-r.1
for
107959398
cit-r.1
for
102624930
gma-u.5
for
547737
gma-u.5
for
100786340
vvi-u.5
for
100261930
ppo-u.5
for
18101948
ppo-u.5
for
18098260
mtr-u.5
for
11418778
sly-u.5
for
101264091
sot-r.1
for
107059432
sot-r.1
for
102580187
sot-r.1
for
102592569
nta-r.1
for
107813910
nta-r.1
for
107797338
osa-u.5
for
4331610
zma-u.5
for
109945322
zma-u.5
for
103626749
zma-u.5
for
103644578
tae-r.2
for
123083123
tae-r.2
for
123098771
tae-r.2
for
543041
hvu-r.1
for
123449698
sbi-r.1
for
8080563
bdi-r.1
for
100840494
cre-r.1
for
CHLRE_03g180350v5


Ortholog ID: 5264
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot sot sot nta nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol CKS1 CKS2 LOC103864814 LOC103834427 LOC106380659 LOC106394808 LOC106449954 LOC107912981 LOC107906642 LOC107959398 LOC102624930 LOC547737 LOC100786340 LOC100261930 LOC18101948 LOC18098260 LOC11418778 LOC101264091 LOC107059432 LOC102580187 LOC102592569 LOC107813910 LOC107797338 LOC4331610 LOC103644578 LOC100282062 LOC100280869 LOC123083123 LOC123098771 LOC543041 LOC123449698 LOC8080563 LOC100840494 CHLRE_03g180350v5
Function* cyclin-dependent kinase-subunit 1 CDK-subunit 2 cyclin-dependent kinases regulatory subunit 2 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 2 cyclin-dependent kinases regulatory subunit 2 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1-like cyclin-dependent kinases regulatory subunit 1-like cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1-like cyclin-dependent kinases regulatory subunit 2-like uncharacterized LOC100282062 cyclin-dependent kinases regulatory subunit cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 cyclin-dependent kinases regulatory subunit 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03040 Spliceosome 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma03060 Protein export 3
gma03040 Spliceosome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo03420 Nucleotide excision repair 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo03420 Nucleotide excision repair 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03040 Spliceosome 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 7
sly04517 IgSF CAM signaling 7
sly04814 Motor proteins 6
sly01240 Biosynthesis of cofactors 3
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 6
sot00260 Glycine, serine and threonine metabolism 3
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot04142 Lysosome 3
sot04145 Phagosome 3
sot00053 Ascorbate and aldarate metabolism 2
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03420 Nucleotide excision repair 3
zma03082 ATP-dependent chromatin remodeling 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03430 Mismatch repair 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 5
cre00240 Pyrimidine metabolism 3
cre01232 Nucleotide metabolism 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817340 817341 103864814 103834427 106380659 106394808 106449954 107912981 107906642 107959398 102624930 547737 100786340 100261930 18101948 18098260 11418778 101264091 107059432 102580187 102592569 107813910 107797338 4331610 103644578 100282062 100280869 123083123 123098771 543041 123449698 8080563 100840494 5728787
The preparation time of this page was 0.1 [sec].