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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G29060   GRAS family transcription factor 
 ath-r.7   AT2G29060   GRAS family transcription factor 
 ath-m.9   AT2G29060   GRAS family transcription factor 
 ath-e.2   AT2G29060   GRAS family transcription factor 
 ath-m.4.bio   AT2G29060   GRAS family transcription factor 
 ath-m.4.hor   AT2G29060   GRAS family transcription factor 
 ath-m.4.lig   AT2G29060   GRAS family transcription factor 
 ath-m.4.str   AT2G29060   GRAS family transcription factor 
 ath-m.4.tis   AT2G29060   GRAS family transcription factor 
 vvi-u.5   100251782   uncharacterized LOC100251782 

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Top 50 coexpressed genes to AT2G29060 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G29060 (ath-u.5 coexpression data)

CoexMap"817454"


athAT2G29060 | Entrez gene ID : 817454      
Species ath vvi tae mtr osa zma bdi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001323611.1 [sequence] [blastp]
NP_180470.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001323611.1)
nucl 9  (predict for NP_180470.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001323611.1)
other 7  (predict for NP_180470.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G29060

.
ath-r.7
for
AT2G29060

.
ath-m.9
for
AT2G29060

.
ath-e.2
for
AT2G29060

.
ath-m.4.bio
for
AT2G29060

.
ath-m.4.hor
for
AT2G29060

.
ath-m.4.lig
for
AT2G29060

.
ath-m.4.str
for
AT2G29060

.
ath-m.4.tis
for
AT2G29060

.
vvi-u.5
for
100251782

.


Ortholog ID: 19245
Species ath bra vvi bna bna
Symbol AT2G29060 LOC103850094 LOC100251782 LOC125575123 LOC125575124
Function* GRAS family transcription factor scarecrow-like protein 34 uncharacterized LOC100251782 scarecrow-like protein 33 scarecrow-like protein 34
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra00340 Histidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817454 103850094 100251782 125575123 125575124
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