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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APG9   autophagy 9 (APG9) 
 ath-r.7   APG9   autophagy 9 (APG9) 
 ath-m.9   APG9   autophagy 9 (APG9) 
 ath-e.2   APG9   autophagy 9 (APG9) 
 ath-m.4.bio   APG9   autophagy 9 (APG9) 
 ath-m.4.hor   APG9   autophagy 9 (APG9) 
 ath-m.4.lig   APG9   autophagy 9 (APG9) 
 ath-m.4.str   APG9   autophagy 9 (APG9) 
 ath-m.4.tis   APG9   autophagy 9 (APG9) 
 bra-r.6   103865117   autophagy-related protein 9 
 bna-r.1   106454865   autophagy-related protein 9 
 bna-r.1   106447033   autophagy-related protein 9-like 
 bna-r.1   106391401   autophagy-related protein 9 
 ghi-r.1   107915050   autophagy-related protein 9 
 ghi-r.1   107924103   autophagy-related protein 9 
 ghi-r.1   107939956   autophagy-related protein 9 
 cit-r.1   102620082   autophagy-related protein 9 
 gma-u.5   732654   autophagy-related protein 9 
 gma-u.5   100809347   autophagy-related protein 9 
 gma-u.5   100779344   autophagy-related protein 9 
 vvi-u.5   100258418   autophagy-related protein 9 
 ppo-u.5   7471977   autophagy-related protein 9 
 ppo-u.5   7454340   autophagy-related protein 9 
 mtr-u.5   25499241   autophagy-related protein 9 
 mtr-u.5   25484294   autophagy-related protein 9 
 sly-u.5   101254295   autophagy-related protein 9 
 sot-r.1   102586846   autophagy-related protein 9 
 nta-r.1   107830896   autophagy-related protein 9 
 nta-r.1   107804901   autophagy-related protein 9-like 
 osa-u.5   4332250   autophagy-related protein 9 
 osa-u.5   107275726   autophagy-related protein 9 
 zma-u.5   100502331   autophagy protein 9 
 tae-r.2   123085276   autophagy-related protein 9 
 tae-r.2   123092766   autophagy-related protein 9 
 tae-r.2   123098062   autophagy-related protein 9 
 hvu-r.1   123449155   autophagy-related protein 9 
 sbi-r.1   8065150   autophagy-related protein 9 
 sbi-r.1   8054341   autophagy-related protein 9 
 bdi-r.1   100843394   autophagy-related protein 9 
 bdi-r.1   100843812   autophagy-related protein 9 
 cre-r.1   CHLRE_09g391500v5   uncharacterized protein 

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Top 50 coexpressed genes to APG9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APG9 (ath-u.5 coexpression data)

CoexMap"817683"


athAPG9 | Entrez gene ID : 817683      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 1 3 1 2 2 1 1 2 2 1 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04136 [list] [network] Autophagy - other (41 genes)
GO BP
GO:0006914 [list] [network] autophagy  (32 genes)  IMP ISS  
GO:0009408 [list] [network] response to heat  (271 genes)  IEP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_850164.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for NP_850164.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_850164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
APG9
ath-r.7
for
APG9
ath-m.9
for
APG9
ath-e.2
for
APG9
ath-m.4.bio
for
APG9
ath-m.4.hor
for
APG9
ath-m.4.lig
for
APG9
ath-m.4.str
for
APG9
ath-m.4.tis
for
APG9
bra-r.6
for
103865117
bna-r.1
for
106454865
bna-r.1
for
106447033
bna-r.1
for
106391401
ghi-r.1
for
107915050
ghi-r.1
for
107924103
ghi-r.1
for
107939956
cit-r.1
for
102620082
gma-u.5
for
732654
gma-u.5
for
100809347
gma-u.5
for
100779344
vvi-u.5
for
100258418
ppo-u.5
for
7471977
ppo-u.5
for
7454340
mtr-u.5
for
25499241
mtr-u.5
for
25484294
sly-u.5
for
101254295
sot-r.1
for
102586846
nta-r.1
for
107830896
nta-r.1
for
107804901
osa-u.5
for
4332250
osa-u.5
for
107275726
zma-u.5
for
100502331
tae-r.2
for
123085276
tae-r.2
for
123092766
tae-r.2
for
123098062
hvu-r.1
for
123449155
sbi-r.1
for
8065150
sbi-r.1
for
8054341
bdi-r.1
for
100843394
bdi-r.1
for
100843812
cre-r.1
for
CHLRE_09g391500v5


Ortholog ID: 5477
Species ath bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol APG9 LOC103865117 LOC106454865 LOC106447033 LOC106391401 LOC107915050 LOC107939956 LOC107895078 LOC102620082 LOC100809347 LOC100779344 LOC100777405 LOC100258418 LOC7471977 LOC7454340 LOC25499241 LOC25484294 LOC101254295 LOC102586846 LOC107830896 LOC107804901 LOC4332250 LOC107275726 LOC100502331 LOC123085276 LOC123092766 LOC123098062 LOC123449155 LOC8065150 LOC8054341 LOC100843394 LOC100843812 CHLRE_09g391500v5
Function* autophagy 9 (APG9) autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9-like autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9-like autophagy-related protein 9 autophagy-related protein 9 autophagy protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 autophagy-related protein 9 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 7
bna00564 Glycerophospholipid metabolism 5
bna00592 alpha-Linolenic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 7
bna00564 Glycerophospholipid metabolism 3
bna00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 6
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04136 Autophagy - other 2
ppo03013 Nucleocytoplasmic transport 2
ppo00260 Glycine, serine and threonine metabolism 2
ppo00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04120 Ubiquitin mediated proteolysis 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 9
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817683 103865117 106454865 106447033 106391401 107915050 107939956 107895078 102620082 100809347 100779344 100777405 100258418 7471977 7454340 25499241 25484294 101254295 102586846 107830896 107804901 4332250 107275726 100502331 123085276 123092766 123098062 123449155 8065150 8054341 100843394 100843812 66054630
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