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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-m.4.bio   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-m.4.hor   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-m.4.lig   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-m.4.str   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-m.4.tis   AT2G33160   glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 
 ath-u.5   AT5G48140   Pectin lyase-like superfamily protein 
 gma-u.5   100810484   exopolygalacturonase 
 gma-u.5   100800324   exopolygalacturonase 
 vvi-u.5   100265436   exopolygalacturonase 
 mtr-u.5   25488062   exopolygalacturonase 
 sly-u.5   101260647   polygalacturonase 
 sly-u.5   101249539   polygalacturonase-like 
 osa-u.5   4341515   exopolygalacturonase 
 osa-u.5   4323970   exopolygalacturonase 
 zma-u.5   103626843   exopolygalacturonase-like 
 zma-u.5   100273946   uncharacterized LOC100273946 

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Top 50 coexpressed genes to AT2G33160 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G33160 (ath-m.9 coexpression data)

CoexMap"817877"


athAT2G33160 | Entrez gene ID : 817877      
Species ath gma vvi mtr sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 7 2 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080159 [list] [network] zygote elongation  (2 genes)  IMP  
GO:0010098 [list] [network] suspensor development  (14 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (45 genes)  IEA  
GO:0004650 [list] [network] polygalacturonase activity  (69 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3104 genes)  IEA  
Protein NP_180874.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 6,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for NP_180874.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_180874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G33160
ath-m.4.bio
for
AT2G33160
ath-m.4.hor
for
AT2G33160
ath-m.4.lig
for
AT2G33160
ath-m.4.str
for
AT2G33160
ath-m.4.tis
for
AT2G33160
ath-u.5
for
AT5G48140
gma-u.5
for
100810484
gma-u.5
for
100800324
vvi-u.5
for
100265436
mtr-u.5
for
25488062
sly-u.5
for
101260647
sly-u.5
for
101249539
osa-u.5
for
4341515
osa-u.5
for
4323970
zma-u.5
for
103626843
zma-u.5
for
100273946


Ortholog ID: 84
Species ath bna ghi gma sly nta nta osa zma zma tae tae
Symbol AT3G07820 LOC106388994 LOC121221131 LOC100779556 LOC101249539 LOC107769351 LOC107822352 LOC4341515 LOC100273946 LOC118472225 LOC123168013 LOC123144207
Function* Pectin lyase-like superfamily protein polygalacturonase-like polygalacturonase-like polygalacturonase polygalacturonase-like polygalacturonase-like exopolygalacturonase clone GBGE184-like exopolygalacturonase uncharacterized LOC100273946 exopolygalacturonase exopolygalacturonase exopolygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
nta00740 Riboflavin metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819973 106388994 121221131 100779556 101249539 107769351 107822352 4341515 100273946 118472225 123168013 123144207
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