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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SRO1   uncharacterized protein 
 ath-r.7   SRO1   uncharacterized protein 
 ath-m.9   SRO1   uncharacterized protein 
 ath-e.2   SRO1   uncharacterized protein 
 ath-m.4.bio   SRO1   uncharacterized protein 
 ath-m.4.hor   SRO1   uncharacterized protein 
 ath-m.4.lig   SRO1   uncharacterized protein 
 ath-m.4.str   SRO1   uncharacterized protein 
 ath-m.4.tis   SRO1   uncharacterized protein 
 ath-u.5   RCD1   WWE protein-protein interaction domain protein family 
 bra-r.6   103833671   inactive poly [ADP-ribose] polymerase RCD1 
 bra-r.6   103840174   inactive poly [ADP-ribose] polymerase RCD1 
 bra-r.6   103865455   probable inactive poly [ADP-ribose] polymerase SRO1 
 bna-r.1   125601580   probable inactive poly [ADP-ribose] polymerase SRO1 
 bna-r.1   125585463   probable inactive poly [ADP-ribose] polymerase SRO1 
 bna-r.1   106366970   probable inactive poly [ADP-ribose] polymerase SRO1 
 ghi-r.1   107946668   inactive poly [ADP-ribose] polymerase RCD1-like 
 ghi-r.1   107930641   inactive poly [ADP-ribose] polymerase RCD1 
 ghi-r.1   107919828   inactive poly [ADP-ribose] polymerase RCD1 
 cit-r.1   102609831   inactive poly [ADP-ribose] polymerase RCD1-like 
 gma-u.5   121175325   inactive poly [ADP-ribose] polymerase RCD1 
 gma-u.5   100800707   inactive poly [ADP-ribose] polymerase RCD1 
 gma-u.5   100797549   inactive poly [ADP-ribose] polymerase RCD1 
 vvi-u.5   100245552   inactive poly [ADP-ribose] polymerase RCD1 
 vvi-u.5   100260925   inactive poly [ADP-ribose] polymerase RCD1 
 ppo-u.5   18094124   inactive poly [ADP-ribose] polymerase RCD1 
 ppo-u.5   7456095   inactive poly [ADP-ribose] polymerase RCD1 
 mtr-u.5   25485596   inactive poly [ADP-ribose] polymerase RCD1 
 sly-u.5   101265942   inactive poly [ADP-ribose] polymerase RCD1 
 sly-u.5   101256097   inactive poly [ADP-ribose] polymerase RCD1-like 
 sly-u.5   101254819   inactive poly [ADP-ribose] polymerase RCD1 
 sot-r.1   102582509   inactive poly [ADP-ribose] polymerase RCD1-like 
 sot-r.1   102584569   inactive poly [ADP-ribose] polymerase RCD1 
 sot-r.1   102584854   inactive poly [ADP-ribose] polymerase RCD1 
 nta-r.1   107823220   inactive poly [ADP-ribose] polymerase RCD1-like 
 nta-r.1   107823296   inactive poly [ADP-ribose] polymerase RCD1 
 nta-r.1   107828586   inactive poly [ADP-ribose] polymerase RCD1 
 osa-u.5   4349501   inactive poly [ADP-ribose] polymerase RCD1 
 zma-u.5   103625711   inactive poly [ADP-ribose] polymerase RCD1 
 zma-u.5   103637733   probable inactive poly [ADP-ribose] polymerase SRO1 
 zma-u.5   101027199   putative inactive poly [ADP-ribose] polymerase SRO1 
 tae-r.2   123114431   inactive poly [ADP-ribose] polymerase RCD1 
 tae-r.2   123050566   inactive poly [ADP-ribose] polymerase RCD1 
 tae-r.2   123181490   inactive poly [ADP-ribose] polymerase RCD1 
 hvu-r.1   123436525   inactive poly [ADP-ribose] polymerase RCD1 
 hvu-r.1   123395204   inactive poly [ADP-ribose] polymerase RCD1-like 
 sbi-r.1   8061389   inactive poly [ADP-ribose] polymerase RCD1 
 bdi-r.1   100845650   inactive poly [ADP-ribose] polymerase RCD1 
 bdi-r.1   100837404   probable inactive poly [ADP-ribose] polymerase SRO1 

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Top 50 coexpressed genes to SRO1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SRO1 (ath-u.5 coexpression data)

CoexMap"818116"


athSRO1 | Entrez gene ID : 818116      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 2 2 1 3 3 3 1 3 3 2 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048573 [list] [network] photoperiodism, flowering  (77 genes)  IMP  
GO:0010102 [list] [network] lateral root morphogenesis  (80 genes)  IMP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003950 [list] [network] NAD+ poly-ADP-ribosyltransferase activity  (8 genes)  IEA  
Protein NP_001323747.1 [sequence] [blastp]
NP_001323748.1 [sequence] [blastp]
NP_565806.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_001323747.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  cyto_pero 2  (predict for NP_001323748.1)
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_565806.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001323747.1)
other 8  (predict for NP_001323748.1)
other 8  (predict for NP_565806.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SRO1
ath-r.7
for
SRO1
ath-m.9
for
SRO1
ath-e.2
for
SRO1
ath-m.4.bio
for
SRO1
ath-m.4.hor
for
SRO1
ath-m.4.lig
for
SRO1
ath-m.4.str
for
SRO1
ath-m.4.tis
for
SRO1
ath-u.5
for
RCD1
bra-r.6
for
103833671
bra-r.6
for
103840174
bra-r.6
for
103865455
bna-r.1
for
125601580
bna-r.1
for
125585463
bna-r.1
for
106366970
ghi-r.1
for
107946668
ghi-r.1
for
107930641
ghi-r.1
for
107919828
cit-r.1
for
102609831
gma-u.5
for
121175325
gma-u.5
for
100800707
gma-u.5
for
100797549
vvi-u.5
for
100245552
vvi-u.5
for
100260925
ppo-u.5
for
18094124
ppo-u.5
for
7456095
mtr-u.5
for
25485596
sly-u.5
for
101265942
sly-u.5
for
101256097
sly-u.5
for
101254819
sot-r.1
for
102582509
sot-r.1
for
102584569
sot-r.1
for
102584854
nta-r.1
for
107823220
nta-r.1
for
107823296
nta-r.1
for
107828586
osa-u.5
for
4349501
zma-u.5
for
103625711
zma-u.5
for
103637733
zma-u.5
for
101027199
tae-r.2
for
123114431
tae-r.2
for
123050566
tae-r.2
for
123181490
hvu-r.1
for
123436525
hvu-r.1
for
123395204
sbi-r.1
for
8061389
bdi-r.1
for
100845650
bdi-r.1
for
100837404


Ortholog ID: 2539
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol SRO1 RCD1 LOC103833671 LOC103840174 LOC103865455 LOC125601580 LOC125585463 LOC106387549 LOC107946668 LOC107930641 LOC107946769 LOC102609831 LOC121175325 LOC100800707 LOC100797549 LOC100245552 LOC100260925 LOC18094124 LOC7456095 LOC25485596 LOC101265942 LOC101256097 LOC101254819 LOC102582509 LOC102584569 LOC102584854 LOC107823220 LOC107828586 LOC107784996 LOC4349501 LOC103625711 LOC103637733 LOC101027199 LOC123050566 LOC123126302 LOC123087501 LOC123436525 LOC123395204 LOC8061389 LOC100845650 LOC100837404
Function* uncharacterized protein WWE protein-protein interaction domain protein family inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 probable inactive poly [ADP-ribose] polymerase SRO1 probable inactive poly [ADP-ribose] polymerase SRO1 probable inactive poly [ADP-ribose] polymerase SRO1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 probable inactive poly [ADP-ribose] polymerase SRO1 putative inactive poly [ADP-ribose] polymerase SRO1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 probable inactive poly [ADP-ribose] polymerase SRO1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 5
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00270 Cysteine and methionine metabolism 2
bdi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818116 840115 103833671 103840174 103865455 125601580 125585463 106387549 107946668 107930641 107946769 102609831 121175325 100800707 100797549 100245552 100260925 18094124 7456095 25485596 101265942 101256097 101254819 102582509 102584569 102584854 107823220 107828586 107784996 4349501 103625711 103637733 101027199 123050566 123126302 123087501 123436525 123395204 8061389 100845650 100837404
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