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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-r.7   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.9   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-e.2   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.4.bio   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.4.hor   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.4.lig   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.4.str   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-m.4.tis   YLS9   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 
 ath-u.5   NHL2   NDR1/HIN1-like 2 
 ath-u.5   NHL3   NDR1/HIN1-like 3 
 gma-u.5   B13-1-9   syringolide-induced protein B13-1-9 
 gma-u.5   100784278   NDR1/HIN1-like protein 10 
 vvi-u.5   100247789   putative syntaxin-24-like 
 ppo-u.5   7466000   NDR1/HIN1-like protein 10 
 ppo-u.5   7488101   NDR1/HIN1-like protein 10 
 mtr-u.5   25483712   NDR1/HIN1-like protein 3 
 mtr-u.5   25499465   NDR1/HIN1-like protein 10 
 mtr-u.5   25497289   NDR1/HIN1-like protein 10 
 sly-u.5   101261735   NDR1/HIN1-like protein 3 
 osa-u.5   4337461   NDR1/HIN1-like protein 2 
 zma-u.5   103642212   NDR1/HIN1-like protein 2 
 zma-u.5   100280654   harpin inducing protein 

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Top 50 coexpressed genes to YLS9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to YLS9 (ath-u.5 coexpression data)

CoexMap"818171"


athYLS9 | Entrez gene ID : 818171      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 2 1 2 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051607 [list] [network] defense response to virus  (55 genes)  IEP  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IMP  
GO:0051707 [list] [network] response to other organism  (1189 genes)  TAS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
Protein NP_181142.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  E.R. 2,  cyto_nucl 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_181142.1)
Subcellular
localization
TargetP
other 8  (predict for NP_181142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
YLS9
ath-r.7
for
YLS9
ath-m.9
for
YLS9
ath-e.2
for
YLS9
ath-m.4.bio
for
YLS9
ath-m.4.hor
for
YLS9
ath-m.4.lig
for
YLS9
ath-m.4.str
for
YLS9
ath-m.4.tis
for
YLS9
ath-u.5
for
NHL2
ath-u.5
for
NHL3
gma-u.5
for
B13-1-9
gma-u.5
for
100784278
vvi-u.5
for
100247789
ppo-u.5
for
7466000
ppo-u.5
for
7488101
mtr-u.5
for
25483712
mtr-u.5
for
25499465
mtr-u.5
for
25497289
sly-u.5
for
101261735
osa-u.5
for
4337461
zma-u.5
for
103642212
zma-u.5
for
100280654


Ortholog ID: 894
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol NHL3 NHL2 LOC103855670 LOC103846978 LOC106385412 LOC106452490 LOC107889436 LOC107925668 LOC102621877 LOC100807174 LOC100807701 LOC100247789 LOC7466000 LOC7488101 LOC25499460 LOC101261735 LOC102584118 LOC102582074 LOC107784326 LOC107770277 LOC4337461 LOC100280654 LOC123047489 LOC123047490 LOC123428472 LOC8062369 LOC100831207
Function* NDR1/HIN1-like 3 NDR1/HIN1-like 2 NDR1/HIN1-like protein 3 NDR1/HIN1-like protein 3 NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 2 protein YLS9-like NDR1/HIN1-like protein 3 NDR1/HIN1-like protein 10 LEA domain-containing protein NDR1/HIN1-like protein 10 putative syntaxin-24-like NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 3 protein YLS9-like protein YLS9-like NDR1/HIN1-like protein 3 NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 2 harpin inducing protein NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 2 NDR1/HIN1-like protein 2 NDR1/HIN1-like protein 10 NDR1/HIN1-like protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 7
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00190 Oxidative phosphorylation 2
sot04142 Lysosome 2
sot04145 Phagosome 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 6
nta00053 Ascorbate and aldarate metabolism 3
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830520 820337 103855670 103846978 106385412 106452490 107889436 107925668 102621877 100807174 100807701 100247789 7466000 7488101 25499460 101261735 102584118 102582074 107784326 107770277 4337461 100280654 123047489 123047490 123428472 8062369 100831207
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