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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-r.7   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.9   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-e.2   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.4.bio   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.4.hor   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.4.lig   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.4.str   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 ath-m.4.tis   FAC1   AMP deaminase, putative / myoadenylate deaminase 
 bra-r.6   103865659   AMP deaminase 
 bra-r.6   103867125   AMP deaminase 
 bna-r.1   106447663   AMP deaminase-like 
 bna-r.1   106410605   AMP deaminase 
 bna-r.1   106406514   AMP deaminase 
 ghi-r.1   107890950   AMP deaminase 
 ghi-r.1   107943763   probable AMP deaminase 
 ghi-r.1   107948947   AMP deaminase 
 cit-r.1   102618723   AMP deaminase-like 
 cit-r.1   102615426   AMP deaminase 
 gma-u.5   100786290   AMP deaminase 
 gma-u.5   100789965   AMP deaminase 
 vvi-u.5   100265525   probable AMP deaminase 
 vvi-u.5   100252323   AMP deaminase 
 ppo-u.5   7460362   AMP deaminase 
 ppo-u.5   7468061   AMP deaminase 
 ppo-u.5   18102350   AMP deaminase 
 mtr-u.5   11411569   AMP deaminase 
 mtr-u.5   120577522   uncharacterized LOC120577522 
 mtr-u.5   112417574   AMP deaminase 
 sly-u.5   101254382   probable AMP deaminase 
 sly-u.5   101246464   adenosine monophosphate deaminase 
 sot-r.1   102594921   probable AMP deaminase 
 sot-r.1   102580386   AMP deaminase 
 nta-r.1   107809706   AMP deaminase 
 nta-r.1   107789715   AMP deaminase 
 nta-r.1   107795991   AMP deaminase 
 osa-u.5   4338495   probable AMP deaminase 
 osa-u.5   4344386   probable AMP deaminase 
 zma-u.5   100275036   AMP deaminase 
 zma-u.5   100382006   uncharacterized LOC100382006 
 tae-r.2   123051393   probable AMP deaminase 
 tae-r.2   123043531   probable AMP deaminase 
 tae-r.2   123052783   probable AMP deaminase 
 hvu-r.1   123441026   probable AMP deaminase 
 hvu-r.1   123424600   probable AMP deaminase 
 sbi-r.1   8084990   probable AMP deaminase 
 sbi-r.1   8083756   probable AMP deaminase 
 bdi-r.1   100840524   probable AMP deaminase 
 bdi-r.1   100840891   probable AMP deaminase 
 cre-r.1   CHLRE_12g531700v5   uncharacterized protein 

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Top 50 coexpressed genes to FAC1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAC1 (ath-u.5 coexpression data)

CoexMap"818408"


athFAC1 | Entrez gene ID : 818408      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 2 2 3 3 2 2 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00230 [list] [network] Purine metabolism (95 genes)
ath01232 [list] [network] Nucleotide metabolism (84 genes)
ath04820 [list] [network] Cytoskeleton in muscle cells (8 genes)
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005741 [list] [network] mitochondrial outer membrane  (37 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19211 genes)  IDA  
GO MF
GO:0003876 [list] [network] AMP deaminase activity  (1 genes)  IGI  
GO:0043424 [list] [network] protein histidine kinase binding  (21 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565886.1 [sequence] [blastp]
NP_850294.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_565886.1)
chlo 3,  E.R. 2,  nucl 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_850294.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_565886.1)
scret 9  (predict for NP_850294.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FAC1
ath-r.7
for
FAC1
ath-m.9
for
FAC1
ath-e.2
for
FAC1
ath-m.4.bio
for
FAC1
ath-m.4.hor
for
FAC1
ath-m.4.lig
for
FAC1
ath-m.4.str
for
FAC1
ath-m.4.tis
for
FAC1
bra-r.6
for
103865659
bra-r.6
for
103867125
bna-r.1
for
106447663
bna-r.1
for
106410605
bna-r.1
for
106406514
ghi-r.1
for
107890950
ghi-r.1
for
107943763
ghi-r.1
for
107948947
cit-r.1
for
102618723
cit-r.1
for
102615426
gma-u.5
for
100786290
gma-u.5
for
100789965
vvi-u.5
for
100265525
vvi-u.5
for
100252323
ppo-u.5
for
7460362
ppo-u.5
for
7468061
ppo-u.5
for
18102350
mtr-u.5
for
11411569
mtr-u.5
for
120577522
mtr-u.5
for
112417574
sly-u.5
for
101254382
sly-u.5
for
101246464
sot-r.1
for
102594921
sot-r.1
for
102580386
nta-r.1
for
107809706
nta-r.1
for
107789715
nta-r.1
for
107795991
osa-u.5
for
4338495
osa-u.5
for
4344386
zma-u.5
for
100275036
zma-u.5
for
100382006
tae-r.2
for
123051393
tae-r.2
for
123043531
tae-r.2
for
123052783
hvu-r.1
for
123441026
hvu-r.1
for
123424600
sbi-r.1
for
8084990
sbi-r.1
for
8083756
bdi-r.1
for
100840524
bdi-r.1
for
100840891
cre-r.1
for
CHLRE_12g531700v5


Ortholog ID: 3089
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol FAC1 LOC103865659 LOC103867125 LOC106447663 LOC106410605 LOC106450946 LOC107890950 LOC107943763 LOC107937074 LOC102618723 LOC102615426 LOC100786290 LOC100789965 LOC100265525 LOC100252323 LOC7460362 LOC7468061 LOC18102350 LOC11411569 LOC112417574 LOC25502814 LOC101254382 LOC101246464 LOC102594921 LOC102580386 LOC107789715 LOC107795991 LOC107782250 LOC4338495 LOC4344386 LOC100275036 LOC100382006 LOC123051393 LOC123129105 LOC123187339 LOC123441026 LOC123424600 LOC8084990 LOC8083756 LOC100840524 LOC100840891 CHLRE_12g531700v5
Function* AMP deaminase, putative / myoadenylate deaminase AMP deaminase AMP deaminase AMP deaminase-like AMP deaminase AMP deaminase AMP deaminase probable AMP deaminase AMP deaminase AMP deaminase-like AMP deaminase AMP deaminase AMP deaminase probable AMP deaminase AMP deaminase AMP deaminase AMP deaminase AMP deaminase AMP deaminase AMP deaminase probable AMP deaminase probable AMP deaminase adenosine monophosphate deaminase probable AMP deaminase AMP deaminase AMP deaminase AMP deaminase putative AMP deaminase probable AMP deaminase probable AMP deaminase AMP deaminase uncharacterized LOC100382006 probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase probable AMP deaminase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 7
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00020 Citrate cycle (TCA cycle) 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna01232 Nucleotide metabolism 4
bna04820 Cytoskeleton in muscle cells 4
bna04626 Plant-pathogen interaction 2
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna01232 Nucleotide metabolism 4
bna04820 Cytoskeleton in muscle cells 4
bna00670 One carbon pool by folate 3
bna04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna01232 Nucleotide metabolism 4
bna04820 Cytoskeleton in muscle cells 4
bna04626 Plant-pathogen interaction 2
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi01232 Nucleotide metabolism 4
ghi04820 Cytoskeleton in muscle cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
ghi00500 Starch and sucrose metabolism 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi01232 Nucleotide metabolism 4
ghi04820 Cytoskeleton in muscle cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
gma04820 Cytoskeleton in muscle cells 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
gma04820 Cytoskeleton in muscle cells 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi00230 Purine metabolism 2
vvi01232 Nucleotide metabolism 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04820 Cytoskeleton in muscle cells 2
ppo00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01232 Nucleotide metabolism 3
mtr00240 Pyrimidine metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr04820 Cytoskeleton in muscle cells 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 4
osa00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00071 Fatty acid degradation 5
tae00280 Valine, leucine and isoleucine degradation 5
tae01232 Nucleotide metabolism 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00071 Fatty acid degradation 4
tae00280 Valine, leucine and isoleucine degradation 4
tae01232 Nucleotide metabolism 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00450 Selenocompound metabolism 3
sbi00230 Purine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 3
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818408 103865659 103867125 106447663 106410605 106450946 107890950 107943763 107937074 102618723 102615426 100786290 100789965 100265525 100252323 7460362 7468061 18102350 11411569 112417574 25502814 101254382 101246464 102594921 102580386 107789715 107795991 107782250 4338495 4344386 100275036 100382006 123051393 123129105 123187339 123441026 123424600 8084990 8083756 100840524 100840891 5718566
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