ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-r.7	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.9	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-e.2	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.4.bio	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.4.hor	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.4.lig	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.4.str	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
ath-m.4.tis	EMB2799	NAD(P)-binding Rossmann-fold superfamily protein
bra-r.6	103857846	uncharacterized LOC103857846
bra-r.6	103867064	uncharacterized LOC103867064
bna-r.1	106450989	uncharacterized LOC106450989
bna-r.1	106410635	uncharacterized LOC106410635
bna-r.1	106438105	uncharacterized LOC106438105
ghi-r.1	107913647	uncharacterized LOC107913647
ghi-r.1	107897548	uncharacterized LOC107897548
cit-r.1	102613116	uncharacterized LOC102613116
gma-u.5	100779953	uncharacterized LOC100779953
gma-u.5	100814401	uncharacterized LOC100814401
gma-u.5	100804718	uncharacterized LOC100804718
vvi-u.5	100251108	uncharacterized LOC100251108
ppo-u.5	7481638	uncharacterized LOC7481638
mtr-u.5	25493439	uncharacterized LOC25493439
mtr-u.5	11445635	uncharacterized LOC11445635
sly-u.5	101266557	uncharacterized LOC101266557
sly-u.5	101266524	uncharacterized LOC101266524
sot-r.1	107062420	uncharacterized LOC107062420
sot-r.1	102591188	uncharacterized LOC102591188
nta-r.1	107769043	uncharacterized LOC107769043
nta-r.1	107806267	uncharacterized LOC107806267
nta-r.1	107818363	uncharacterized LOC107818363
osa-u.5	4325727	uncharacterized LOC4325727
osa-u.5	4325729	uncharacterized LOC4325729
zma-u.5	100191360	uncharacterized LOC100191360
zma-u.5	100193101	NAD(P)-binding Rossmann-fold superfamily protein
tae-r.2	123096522	uncharacterized LOC123096522
tae-r.2	123187036	uncharacterized LOC123187036
tae-r.2	123043224	uncharacterized LOC123043224
hvu-r.1	123448108	uncharacterized LOC123448108
hvu-r.1	123424393	uncharacterized LOC123424393
sbi-r.1	8075361	uncharacterized LOC8075361
sbi-r.1	8075362	uncharacterized LOC8075362
bdi-r.1	100835528	uncharacterized LOC100835528
bdi-r.1	100824788	uncharacterized LOC100824788
cre-r.1	CHLRE_13g608000v5	uncharacterized protein

Top 50 coexpressed genes to EMB2799 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to EMB2799 (ath-u.5 coexpression data)

CoexMap"818494"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009570 [list] [network] chloroplast stroma	(693 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	HDA ISM

GO MF

Protein

NP_181441.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, mito 1, extr 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1

(predict for NP_181441.3)

Subcellular
localization
TargetP

chlo 9

(predict for NP_181441.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for EMB2799	ath-r.7 for EMB2799	ath-m.9 for EMB2799	ath-e.2 for EMB2799	ath-m.4.bio for EMB2799	ath-m.4.hor for EMB2799	ath-m.4.lig for EMB2799	ath-m.4.str for EMB2799	ath-m.4.tis for EMB2799	bra-r.6 for 103857846	bra-r.6 for 103867064	bna-r.1 for 106450989	bna-r.1 for 106410635	bna-r.1 for 106438105	ghi-r.1 for 107913647	ghi-r.1 for 107897548	cit-r.1 for 102613116	gma-u.5 for 100779953	gma-u.5 for 100814401	gma-u.5 for 100804718	vvi-u.5 for 100251108	ppo-u.5 for 7481638	mtr-u.5 for 25493439	mtr-u.5 for 11445635	sly-u.5 for 101266557	sly-u.5 for 101266524	sot-r.1 for 107062420	sot-r.1 for 102591188	nta-r.1 for 107769043	nta-r.1 for 107806267	nta-r.1 for 107818363	osa-u.5 for 4325727	osa-u.5 for 4325729	zma-u.5 for 100191360	zma-u.5 for 100193101	tae-r.2 for 123096522	tae-r.2 for 123187036	tae-r.2 for 123043224	hvu-r.1 for 123448108	hvu-r.1 for 123424393	sbi-r.1 for 8075361	sbi-r.1 for 8075362	bdi-r.1 for 100835528	bdi-r.1 for 100824788	cre-r.1 for CHLRE_13g608000v5

Ortholog

Ortholog ID: 4359

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EMB2799

Function^*

NAD(P)-binding Rossmann-fold superfamily protein

uncharacterized LOC103857846

uncharacterized LOC103867064

uncharacterized LOC106450989

uncharacterized LOC106410635

uncharacterized LOC125585076

uncharacterized LOC107913647

uncharacterized LOC107897548

uncharacterized LOC102613116

uncharacterized LOC100814401

uncharacterized LOC100804718

uncharacterized LOC100776260

uncharacterized LOC100251108

uncharacterized LOC7481638

uncharacterized LOC25493439

uncharacterized LOC11445635

uncharacterized LOC101266557

uncharacterized LOC101266524

uncharacterized LOC107062420

uncharacterized LOC102591188

uncharacterized LOC107806267

uncharacterized LOC107818363

uncharacterized LOC107810922

uncharacterized LOC4325727

uncharacterized LOC4325729

uncharacterized LOC100191360

NAD(P)-binding Rossmann-fold superfamily protein

uncharacterized LOC123187036

uncharacterized LOC123051092

uncharacterized LOC123086426

uncharacterized LOC123448108

uncharacterized LOC123424393

uncharacterized LOC8075361

uncharacterized LOC8075362

uncharacterized LOC100835528

uncharacterized LOC100824788

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	2
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	5
sly00010	Glycolysis / Gluconeogenesis	2
sly01230	Biosynthesis of amino acids	2
sly04146	Peroxisome	2
sly01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	5
sot00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	6
sot00230	Purine metabolism	2
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6
nta00230	Purine metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	3
osa00195	Photosynthesis	2
osa04146	Peroxisome	2
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	3
osa00030	Pentose phosphate pathway	2
osa00480	Glutathione metabolism	2
osa00860	Porphyrin metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	3
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	6
tae01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	3
hvu00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	3
bdi00020	Citrate cycle (TCA cycle)	2
bdi00270	Cysteine and methionine metabolism	2
bdi00566	Sulfoquinovose metabolism	2
bdi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	5
bdi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	3
cre00513	Various types of N-glycan biosynthesis	3
cre04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

818494

103857846

103867064

106450989

106410635

125585076

107913647

107897548

102613116

100814401

100804718

100776260

100251108

7481638

25493439

11445635

101266557

101266524

107062420

102591188

107806267

107818363

107810922

4325727

4325729

100191360

100193101

123187036

123051092

123086426

123448108

123424393

8075361

8075362

100835528

100824788

5724657

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	2	3	2	1	3	1	1	2	2	2	3	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to EMB2799 (ath-u.5 coexpression data)

Top 50 enrichment test to EMB2799 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**