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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-r.7   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.9   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-e.2   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.4.bio   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.4.hor   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.4.lig   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.4.str   APC7   tetratricopeptide repeat (TPR)-containing protein 
 ath-m.4.tis   APC7   tetratricopeptide repeat (TPR)-containing protein 
 gma-u.5   100808673   anaphase-promoting complex subunit 7 
 gma-u.5   100785127   anaphase-promoting complex subunit 7 
 vvi-u.5   100242558   anaphase-promoting complex subunit 7 
 ppo-u.5   18101854   anaphase-promoting complex subunit 7 
 ppo-u.5   7475380   anaphase-promoting complex subunit 7 
 mtr-u.5   11440839   anaphase-promoting complex subunit 7 
 sly-u.5   101244411   anaphase-promoting complex subunit 7 
 osa-u.5   4337822   anaphase-promoting complex subunit 7 
 zma-u.5   103641394   anaphase-promoting complex subunit 7 

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Top 50 coexpressed genes to APC7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APC7 (ath-u.5 coexpression data)

CoexMap"818495"


athAPC7 | Entrez gene ID : 818495      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031513.1 [sequence] [blastp]
NP_850309.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 2  (predict for NP_001031513.1)
cyto 6,  chlo 2,  nucl 2  (predict for NP_850309.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001031513.1)
other 9  (predict for NP_850309.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
APC7

.
ath-r.7
for
APC7

.
ath-m.9
for
APC7

.
ath-e.2
for
APC7

.
ath-m.4.bio
for
APC7

.
ath-m.4.hor
for
APC7

.
ath-m.4.lig
for
APC7

.
ath-m.4.str
for
APC7

.
ath-m.4.tis
for
APC7

.
gma-u.5
for
100808673

.
gma-u.5
for
100785127

.
vvi-u.5
for
100242558

.
ppo-u.5
for
18101854

.
ppo-u.5
for
7475380

.
mtr-u.5
for
11440839

.
sly-u.5
for
101244411

.
osa-u.5
for
4337822

.
zma-u.5
for
103641394

.


Ortholog ID: 10030
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol APC7 LOC100808673 LOC100785127 LOC101244411 LOC4337822 LOC103641394 LOC103867065 LOC100242558 LOC18101854 LOC7475380 LOC11440839 LOC123191219 LOC123112664 LOC123425353 LOC107916035 LOC107920706 LOC106450984 LOC125609265 LOC8075981 LOC102597497 LOC102607002 LOC100823881 LOC107801976 LOC107779801
Function* tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7 anaphase-promoting complex subunit 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 3
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma04142 Lysosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa03015 mRNA surveillance pathway 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03040 Spliceosome 2
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr00562 Inositol phosphate metabolism 2
mtr03040 Spliceosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03018 RNA degradation 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00190 Oxidative phosphorylation 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03015 mRNA surveillance pathway 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03040 Spliceosome 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi03015 mRNA surveillance pathway 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta04120 Ubiquitin mediated proteolysis 4
nta03060 Protein export 2
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta00531 Glycosaminoglycan degradation 2
nta04142 Lysosome 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818495 100808673 100785127 101244411 4337822 103641394 103867065 100242558 18101854 7475380 11440839 123191219 123112664 123425353 107916035 107920706 106450984 125609265 8075981 102597497 102607002 100823881 107801976 107779801
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