Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-r.7   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.9   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-e.2   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.4.bio   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.4.hor   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.4.lig   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.4.str   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 ath-m.4.tis   AT2G42560   late embryogenesis abundant domain-containing protein / LEA domain-containing protein 
 bra-r.6   103865955   embryonic protein DC-8 
 bna-r.1   125584320   embryonic protein DC-8-like 
 bna-r.1   106447584   embryonic protein DC-8 
 bna-r.1   106391719   embryonic protein DC-8-like 
 ghi-r.1   121223669   seed biotin-containing protein SBP65 
 ghi-r.1   107911713   seed biotin-containing protein SBP65 
 cit-r.1   102617247   seed biotin-containing protein SBP65 
 gma-u.5   SBP65   LEA protein 
 vvi-u.5   104880824   seed biotin-containing protein SBP65 
 ppo-u.5   7494600   seed biotin-containing protein SBP65 
 mtr-u.5   25487771   seed biotin-containing protein SBP65 
 sly-u.5   101259649   seed biotin-containing protein SBP65-like 
 sot-r.1   102593355   seed biotin-containing protein SBP65-like 

close


Top 50 coexpressed genes to AT2G42560 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT2G42560 (ath-u.5 coexpression data)

CoexMap"818856"


athAT2G42560 | Entrez gene ID : 818856      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot sbi cre tae zma osa bdi nta hvu
Paralog 9 1 3 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009631 [list] [network] cold acclimation  (60 genes)  IDA  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_181784.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 3  (predict for NP_181784.1)
Subcellular
localization
TargetP
other 7  (predict for NP_181784.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G42560
ath-r.7
for
AT2G42560
ath-m.9
for
AT2G42560
ath-e.2
for
AT2G42560
ath-m.4.bio
for
AT2G42560
ath-m.4.hor
for
AT2G42560
ath-m.4.lig
for
AT2G42560
ath-m.4.str
for
AT2G42560
ath-m.4.tis
for
AT2G42560
bra-r.6
for
103865955
bna-r.1
for
125584320
bna-r.1
for
106447584
bna-r.1
for
106391719
ghi-r.1
for
121223669
ghi-r.1
for
107911713
cit-r.1
for
102617247
gma-u.5
for
SBP65
vvi-u.5
for
104880824
ppo-u.5
for
7494600
mtr-u.5
for
25487771
sly-u.5
for
101259649
sot-r.1
for
102593355


Ortholog ID: 12188
Species ath bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot
Symbol AT2G42560 LOC103865955 LOC125584320 LOC106447584 LOC106391719 LOC121223669 LOC107911713 LOC102617247 SBP65 LOC104880824 LOC7494600 LOC25487771 LOC101259649 LOC102593355
Function* late embryogenesis abundant domain-containing protein / LEA domain-containing protein embryonic protein DC-8 embryonic protein DC-8-like embryonic protein DC-8 embryonic protein DC-8-like seed biotin-containing protein SBP65 seed biotin-containing protein SBP65 seed biotin-containing protein SBP65 LEA protein seed biotin-containing protein SBP65 seed biotin-containing protein SBP65 seed biotin-containing protein SBP65 seed biotin-containing protein SBP65-like seed biotin-containing protein SBP65-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
bna04626 Plant-pathogen interaction 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818856 103865955 125584320 106447584 106391719 121223669 107911713 102617247 547879 104880824 7494600 25487771 101259649 102593355
The preparation time of this page was 1.6 [sec].