ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT2G44430	DNA-binding bromodomain-containing protein
ath-r.7	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.9	AT2G44430	DNA-binding bromodomain-containing protein
ath-e.2	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.4.bio	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.4.hor	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.4.lig	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.4.str	AT2G44430	DNA-binding bromodomain-containing protein
ath-m.4.tis	AT2G44430	DNA-binding bromodomain-containing protein
ath-u.5	AT3G57980	DNA-binding bromodomain-containing protein
ath-u.5	AT3G60110	DNA-binding bromodomain-containing protein
bra-r.6	103841694	DDT domain-containing protein DDB_G0282237
bra-r.6	103841862	uncharacterized LOC103841862
bra-r.6	103865927	uncharacterized LOC103865927
bna-r.1	106445115	biorientation of chromosomes in cell division protein 1-like 1
bna-r.1	106412149	uncharacterized LOC106412149
bna-r.1	111214965	uncharacterized LOC111214965
ghi-r.1	107961705	uncharacterized LOC107961705
ghi-r.1	107891258	uncharacterized LOC107891258
ghi-r.1	107889971	uncharacterized LOC107889971
cit-r.1	102630925	uncharacterized LOC102630925
cit-r.1	102607753	uncharacterized LOC102607753
cit-r.1	102609075	uncharacterized LOC102609075
gma-u.5	100811021	hyphally regulated cell wall protein 1
gma-u.5	100779988	lateral signaling target protein 2 homolog
vvi-u.5	100263099	uncharacterized LOC100263099
ppo-u.5	7489296	uncharacterized LOC7489296
ppo-u.5	18094987	uncharacterized LOC18094987
mtr-u.5	11419562	uncharacterized LOC11419562
sly-u.5	101251918	uncharacterized LOC101251918
sot-r.1	102600407	ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800
nta-r.1	107819199	uncharacterized LOC107819199
nta-r.1	107780269	uncharacterized LOC107780269
nta-r.1	107786375	uncharacterized LOC107786375
osa-u.5	4346003	uncharacterized LOC4346003
osa-u.5	9269664	uncharacterized LOC9269664
zma-u.5	100501552	uncharacterized LOC100501552
zma-u.5	100277965	uncharacterized LOC100277965
tae-r.2	100873116	uncharacterized LOC100873116
tae-r.2	123104177	nuclease SbcCD subunit C
tae-r.2	123121935	neurofilament heavy polypeptide
hvu-r.1	123399420	uncharacterized LOC123399420
hvu-r.1	123408579	uncharacterized LOC123408579
sbi-r.1	8064022	nucleolar and coiled-body phosphoprotein 1
sbi-r.1	8055879	uncharacterized LOC8055879
bdi-r.1	100823285	nuclear receptor corepressor 2

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_181971.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_181971.1)

Subcellular
localization
TargetP

other 9

(predict for NP_181971.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G44430	ath-r.7 for AT2G44430	ath-m.9 for AT2G44430	ath-e.2 for AT2G44430	ath-m.4.bio for AT2G44430	ath-m.4.hor for AT2G44430	ath-m.4.lig for AT2G44430	ath-m.4.str for AT2G44430	ath-m.4.tis for AT2G44430	ath-u.5 for AT3G57980	ath-u.5 for AT3G60110	bra-r.6 for 103841694	bra-r.6 for 103841862	bra-r.6 for 103865927	bna-r.1 for 106445115	bna-r.1 for 106412149	bna-r.1 for 111214965	ghi-r.1 for 107961705	ghi-r.1 for 107891258	ghi-r.1 for 107889971	cit-r.1 for 102630925	cit-r.1 for 102607753	cit-r.1 for 102609075	gma-u.5 for 100811021	gma-u.5 for 100779988	vvi-u.5 for 100263099	ppo-u.5 for 7489296	ppo-u.5 for 18094987	mtr-u.5 for 11419562	sly-u.5 for 101251918	sot-r.1 for 102600407	nta-r.1 for 107819199	nta-r.1 for 107780269	nta-r.1 for 107786375	osa-u.5 for 4346003	osa-u.5 for 9269664	zma-u.5 for 100501552	zma-u.5 for 100277965	tae-r.2 for 100873116	tae-r.2 for 123104177	tae-r.2 for 123121935	hvu-r.1 for 123399420	hvu-r.1 for 123408579	sbi-r.1 for 8064022	sbi-r.1 for 8055879	bdi-r.1 for 100823285

Ortholog

Ortholog ID: 2627

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

DNA-binding bromodomain-containing protein

uncharacterized LOC103841862

uncharacterized LOC103865927

bromodomain-containing protein bet-1

biorientation of chromosomes in cell division protein 1-like 1

uncharacterized LOC111214965

uncharacterized LOC111215129

uncharacterized LOC107891258

uncharacterized LOC107889971

myb-like protein X

uncharacterized LOC102630925

uncharacterized LOC102607753

uncharacterized LOC102609075

hyphally regulated cell wall protein 1

lateral signaling target protein 2 homolog

uncharacterized LOC100263099

uncharacterized LOC7489296

uncharacterized LOC18094987

uncharacterized LOC11419562

uncharacterized LOC101251918

ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800

uncharacterized LOC107780269

uncharacterized LOC107786375

uncharacterized LOC107794870

uncharacterized LOC4346003

uncharacterized LOC9269664

uncharacterized LOC100501552

uncharacterized LOC100277965

neurofilament heavy polypeptide

uncharacterized LOC123164796

uncharacterized LOC123151249

uncharacterized LOC123399420

uncharacterized LOC123408579

nucleolar and coiled-body phosphoprotein 1

uncharacterized LOC8055879

nuclear receptor corepressor 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00051	Fructose and mannose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

819050

825181

103841862

103865927

103862910

106445115

111214965

111215129

107891258

107889971

107891259

102630925

102607753

102609075

100811021

100779988

100263099

7489296

18094987

11419562

101251918

102600407

107780269

107786375

107794870

4346003

9269664

100501552

100277965

123121935

123164796

123151249

123399420

123408579

8064022

8055879

100823285

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G44430 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G44430 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	3	3	2	1	2	1	1	1	3	2	2	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G44430 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G44430 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**