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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT2G44920   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103866844   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 bna-r.1   106450770   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 bna-r.1   106390286   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ghi-r.1   107930054   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ghi-r.1   121207799   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 cit-r.1   102629323   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 gma-u.5   100806792   thylakoid lumenal 15 kDa protein 1, chloroplastic-like 
 gma-u.5   100500352   pentapeptide repeat-containing protein 
 vvi-u.5   100244370   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ppo-u.5   7487975   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 ppo-u.5   7490377   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 mtr-u.5   25489345   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 sly-u.5   101267125   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 sot-r.1   102604196   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 nta-r.1   107765234   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 osa-u.5   4325465   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 zma-u.5   103634821   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 tae-r.2   123068541   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 tae-r.2   123077051   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 tae-r.2   123068539   thylakoid lumenal 15 kDa protein 1, chloroplastic-like 
 hvu-r.1   123442639   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 sbi-r.1   8073314   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 bdi-r.1   100832450   thylakoid lumenal 15 kDa protein 1, chloroplastic 
 cre-r.1   CHLRE_16g687300v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G44920 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G44920 (ath-u.5 coexpression data)

CoexMap"819101"


athAT2G44920 | Entrez gene ID : 819101      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (52 genes)  HDA IDA  
GO:0031977 [list] [network] thylakoid lumen  (69 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_566030.1 [sequence] [blastp]
NP_566031.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for NP_566030.1)
chlo 4,  vacu 4,  nucl 1,  E.R. 1,  golg 1  (predict for NP_566031.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_566030.1)
chlo 9  (predict for NP_566031.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G44920
ath-r.7
for
AT2G44920
ath-m.9
for
AT2G44920
ath-e.2
for
AT2G44920
ath-m.4.bio
for
AT2G44920
ath-m.4.hor
for
AT2G44920
ath-m.4.lig
for
AT2G44920
ath-m.4.str
for
AT2G44920
ath-m.4.tis
for
AT2G44920
bra-r.6
for
103866844
bna-r.1
for
106450770
bna-r.1
for
106390286
ghi-r.1
for
107930054
ghi-r.1
for
121207799
cit-r.1
for
102629323
gma-u.5
for
100806792
gma-u.5
for
100500352
vvi-u.5
for
100244370
ppo-u.5
for
7487975
ppo-u.5
for
7490377
mtr-u.5
for
25489345
sly-u.5
for
101267125
sot-r.1
for
102604196
nta-r.1
for
107765234
osa-u.5
for
4325465
zma-u.5
for
103634821
tae-r.2
for
123068541
tae-r.2
for
123077051
tae-r.2
for
123068539
hvu-r.1
for
123442639
sbi-r.1
for
8073314
bdi-r.1
for
100832450
cre-r.1
for
CHLRE_16g687300v5


Ortholog ID: 8916
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol AT2G44920 LOC103866844 LOC106450770 LOC106390286 LOC107930054 LOC121207799 LOC102629323 LOC100806792 LOC100500352 LOC100244370 LOC7487975 LOC7490377 LOC25489345 LOC101267125 LOC102604196 LOC107765234 LOC4325465 LOC103634821 LOC123068539 LOC123060059 LOC123442639 LOC8073314 LOC100832450 CHLRE_16g687300v5
Function* Tetratricopeptide repeat (TPR)-like superfamily protein thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic-like pentapeptide repeat-containing protein thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic-like thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic thylakoid lumenal 15 kDa protein 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819101 103866844 106450770 106390286 107930054 121207799 102629323 100806792 100500352 100244370 7487975 7490377 25489345 101267125 102604196 107765234 4325465 103634821 123068539 123060059 123442639 8073314 100832450 5717662
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