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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   SEC   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100798815   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 gma-u.5   100806661   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 vvi-u.5   100244912   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 ppo-u.5   7469827   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 ppo-u.5   7487728   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 mtr-u.5   11431731   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 sly-u.5   101255198   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 sly-u.5   101244231   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 osa-u.5   107276395   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 osa-u.5   107277461   probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC 
 zma-u.5   100381672   uncharacterized LOC100381672 

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Top 50 coexpressed genes to SEC (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SEC (ath-u.5 coexpression data)

CoexMap"819579"


athSEC | Entrez gene ID : 819579      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00514 [list] [network] Other types of O-glycan biosynthesis (13 genes)
ath03083 [list] [network] Polycomb repressive complex (65 genes)
GO BP
GO:0006493 [list] [network] protein O-linked glycosylation  (10 genes)  IDA  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0097363 [list] [network] protein O-acetylglucosaminyltransferase activity  (2 genes)  IEA  
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001326045.1 [sequence] [blastp]
NP_187074.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001326045.1)
cyto 8,  chlo 1,  nucl 1,  cyto_mito 1  (predict for NP_187074.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326045.1)
chlo 3,  scret 3  (predict for NP_187074.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SEC

.
ath-r.7
for
SEC

.
ath-m.9
for
SEC

.
ath-e.2
for
SEC

.
ath-m.4.bio
for
SEC

.
ath-m.4.hor
for
SEC

.
ath-m.4.lig
for
SEC

.
ath-m.4.str
for
SEC

.
ath-m.4.tis
for
SEC

.
gma-u.5
for
100798815

.
gma-u.5
for
100806661

.
vvi-u.5
for
100244912

.
ppo-u.5
for
7469827

.
ppo-u.5
for
7487728

.
mtr-u.5
for
11431731

.
sly-u.5
for
101255198

.
sly-u.5
for
101244231

.
osa-u.5
for
107276395

.
osa-u.5
for
107277461

.
zma-u.5
for
100381672

.


Ortholog ID: 5982
Species ath gma gma sly sly osa osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol SEC LOC100806661 LOC100798815 LOC101255198 LOC101244231 LOC107276395 LOC107277461 LOC100381672 LOC103850053 LOC100244912 LOC7469827 LOC7487728 LOC11431731 LOC123053079 LOC123045247 LOC123426467 LOC107914766 LOC107902991 LOC106445285 LOC106365673 LOC8056694 LOC102597898 LOC102579515 LOC102613752 LOC100842542 LOC100822082 LOC107820440 LOC107788514
Function* Tetratricopeptide repeat (TPR)-like superfamily protein probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC uncharacterized LOC100381672 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 3
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00514 Other types of O-glycan biosynthesis 2
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00514 Other types of O-glycan biosynthesis 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae00514 Other types of O-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 7
tae00514 Other types of O-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 4
ghi03083 Polycomb repressive complex 4
ghi00330 Arginine and proline metabolism 3
ghi01230 Biosynthesis of amino acids 3
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 2
bna03083 Polycomb repressive complex 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00514 Other types of O-glycan biosynthesis 2
bna03083 Polycomb repressive complex 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta03083 Polycomb repressive complex 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00514 Other types of O-glycan biosynthesis 2
nta03083 Polycomb repressive complex 2
nta04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819579 100806661 100798815 101255198 101244231 107276395 107277461 100381672 103850053 100244912 7469827 7487728 11431731 123053079 123045247 123426467 107914766 107902991 106445285 106365673 8056694 102597898 102579515 102613752 100842542 100822082 107820440 107788514
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