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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-m.4.bio   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-m.4.hor   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-m.4.lig   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-m.4.str   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-m.4.tis   AT3G04700   carboxylate clamp-TPR protein (DUF1685) 
 ath-u.5   AT5G28690   carboxylate clamp-TPR protein (DUF1685) 
 bna-r.1   111214112   uncharacterized LOC111214112 
 bna-r.1   111206474   uncharacterized LOC111206474 
 gma-u.5   100784530   uncharacterized LOC100784530 
 gma-u.5   100305652   uncharacterized LOC100305652 
 sly-u.5   101258598   uncharacterized LOC101258598 
 osa-u.5   4335373   uncharacterized LOC4335373 
 zma-u.5   100276437   uncharacterized LOC100276437 
 tae-r.2   123041297   uncharacterized LOC123041297 
 tae-r.2   123185382   uncharacterized LOC123185382 
 tae-r.2   123049293   uncharacterized LOC123049293 

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Top 50 coexpressed genes to AT3G04700 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G04700 (ath-m.9 coexpression data)

CoexMap""


athAT3G04700 | Entrez gene ID : 819628    
Species ath bna gma sly osa zma tae nta bdi cit sot hvu mtr sbi bra ghi cre vvi ppo
Paralog 7 2 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function carboxylate clamp-TPR protein (DUF1685)
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_187121.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  mito 1  (predict for NP_187121.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_187121.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G04700


ath-m.4.bio
for
AT3G04700


ath-m.4.hor
for
AT3G04700


ath-m.4.lig
for
AT3G04700


ath-m.4.str
for
AT3G04700


ath-m.4.tis
for
AT3G04700


ath-u.5
for
AT5G28690


bna-r.1
for
111214112


bna-r.1
for
111206474


gma-u.5
for
100784530


gma-u.5
for
100305652


sly-u.5
for
101258598


osa-u.5
for
4335373


zma-u.5
for
100276437


tae-r.2
for
123041297


tae-r.2
for
123185382


tae-r.2
for
123049293

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Ortholog ID: 3447
Species ath bna bna bna gma gma sly osa zma tae tae tae
Symbol AT5G28690 LOC111214112 LOC111206474 BNAA06G29240D LOC100784530 LOC100305652 LOC101258598 LOC4335373 LOC100276437 LOC123041297 LOC123185382 LOC123049293
Function* carboxylate clamp-TPR protein (DUF1685) uncharacterized LOC111214112 uncharacterized LOC111206474 uncharacterized BNAA06G29240D uncharacterized LOC100784530 uncharacterized LOC100305652 uncharacterized LOC101258598 uncharacterized LOC4335373 uncharacterized LOC100276437 uncharacterized LOC123041297 uncharacterized LOC123185382 uncharacterized LOC123049293
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832976 111214112 111206474 106352204 100784530 100305652 101258598 4335373 100276437 123041297 123185382 123049293
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