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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G07195   RPM1-interacting protein 4 (RIN4) family protein 
 ath-r.7   AT3G07195   RPM1-interacting protein 4 (RIN4) family protein 
 ath-e.2   AT3G07195   RPM1-interacting protein 4 (RIN4) family protein 
 bra-r.6   103859207   RPM1-interacting protein 4 
 bra-r.6   103870691   E3 ubiquitin-protein ligase RNF4 
 bna-r.1   106345629   heterogeneous nuclear ribonucleoprotein U-like protein 1 
 bna-r.1   106385656   RPM1-interacting protein 4 
 bna-r.1   106385686   RPM1-interacting protein 4-like 

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Top 50 coexpressed genes to AT3G07195 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G07195 (ath-u.5 coexpression data)

CoexMap"819907"


athAT3G07195 | Entrez gene ID : 819907      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009625 [list] [network] response to insect  (66 genes)  IEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327654.1 [sequence] [blastp]
NP_683537.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001327654.1)
nucl 7,  mito 1,  chlo 1,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for NP_683537.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327654.1)
other 8  (predict for NP_683537.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G07195
ath-r.7
for
AT3G07195
ath-e.2
for
AT3G07195
bra-r.6
for
103859207
bra-r.6
for
103870691
bna-r.1
for
106345629
bna-r.1
for
106385656
bna-r.1
for
106385686


Ortholog ID: 18111
Species ath bra bra bna bna bna
Symbol AT3G07195 LOC103859207 LOC103870691 LOC106345629 LOC106385686 LOC106409674
Function* RPM1-interacting protein 4 (RIN4) family protein RPM1-interacting protein 4 E3 ubiquitin-protein ligase RNF4 heterogeneous nuclear ribonucleoprotein U-like protein 1 RPM1-interacting protein 4-like RPM1-interacting protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra03082 ATP-dependent chromatin remodeling 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819907 103859207 103870691 106345629 106385686 106409674
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