Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G07530   integrator complex subunit 
 ath-r.7   AT3G07530   integrator complex subunit 
 ath-m.9   AT3G07530   integrator complex subunit 
 ath-e.2   AT3G07530   integrator complex subunit 
 ath-m.4.bio   AT3G07530   integrator complex subunit 
 ath-m.4.hor   AT3G07530   integrator complex subunit 
 ath-m.4.lig   AT3G07530   integrator complex subunit 
 ath-m.4.str   AT3G07530   integrator complex subunit 
 ath-m.4.tis   AT3G07530   integrator complex subunit 
 bra-r.6   103870661   integrator complex subunit 9 
 bna-r.1   106452933   integrator complex subunit 9 
 bna-r.1   106400697   integrator complex subunit 9-like 
 ghi-r.1   107928034   integrator complex subunit 9 homolog 
 ghi-r.1   107962357   integrator complex subunit 9 homolog 
 cit-r.1   102624329   uncharacterized LOC102624329 
 gma-u.5   100797797   integrator complex subunit 9 
 vvi-u.5   100262013   uncharacterized LOC100262013 
 ppo-u.5   18098430   uncharacterized LOC18098430 
 mtr-u.5   11414679   integrator complex subunit 9 
 sly-u.5   101250484   uncharacterized LOC101250484 
 sot-r.1   102597081   integrator complex subunit 9 
 nta-r.1   107824878   uncharacterized LOC107824878 
 nta-r.1   107815402   uncharacterized LOC107815402 
 osa-u.5   4332221   uncharacterized LOC4332221 
 zma-u.5   100381696   uncharacterized LOC100381696 
 tae-r.2   123080198   integrator complex subunit 9 homolog 
 tae-r.2   123080191   integrator complex subunit 9 homolog 
 tae-r.2   123071881   integrator complex subunit 9 homolog 
 hvu-r.1   123445155   integrator complex subunit 9 homolog 
 sbi-r.1   8056145   integrator complex subunit 9 homolog 
 bdi-r.1   100830500   integrator complex subunit 9 homolog 

close


Top 50 coexpressed genes to AT3G07530 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G07530 (ath-u.5 coexpression data)

CoexMap"819942"


athAT3G07530 | Entrez gene ID : 819942      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016180 [list] [network] snRNA processing  (4 genes)  IEA  
GO CC
GO:0032039 [list] [network] integrator complex  (1 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001325703.1 [sequence] [blastp]
NP_001325704.1 [sequence] [blastp]
NP_001325705.1 [sequence] [blastp]
NP_001325706.1 [sequence] [blastp]
NP_187409.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  plas 2,  cyto_plas 2  (predict for NP_001325703.1)
nucl 3,  cyto 3,  cyto_nucl 3,  golg 2  (predict for NP_001325704.1)
nucl 4,  cyto 2,  plas 2,  cyto_plas 2  (predict for NP_001325705.1)
nucl 4,  cyto 2,  plas 2,  cyto_plas 2  (predict for NP_001325706.1)
nucl 4,  cyto 2,  plas 2,  cyto_plas 2  (predict for NP_187409.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001325703.1)
other 7,  scret 3  (predict for NP_001325704.1)
other 8  (predict for NP_001325705.1)
other 8  (predict for NP_001325706.1)
other 8  (predict for NP_187409.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G07530
ath-r.7
for
AT3G07530
ath-m.9
for
AT3G07530
ath-e.2
for
AT3G07530
ath-m.4.bio
for
AT3G07530
ath-m.4.hor
for
AT3G07530
ath-m.4.lig
for
AT3G07530
ath-m.4.str
for
AT3G07530
ath-m.4.tis
for
AT3G07530
bra-r.6
for
103870661
bna-r.1
for
106452933
bna-r.1
for
106400697
ghi-r.1
for
107928034
ghi-r.1
for
107962357
cit-r.1
for
102624329
gma-u.5
for
100797797
vvi-u.5
for
100262013
ppo-u.5
for
18098430
mtr-u.5
for
11414679
sly-u.5
for
101250484
sot-r.1
for
102597081
nta-r.1
for
107824878
nta-r.1
for
107815402
osa-u.5
for
4332221
zma-u.5
for
100381696
tae-r.2
for
123080198
tae-r.2
for
123080191
tae-r.2
for
123071881
hvu-r.1
for
123445155
sbi-r.1
for
8056145
bdi-r.1
for
100830500


Ortholog ID: 10741
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G07530 LOC103870661 LOC106452933 LOC106400697 LOC107928034 LOC107962357 LOC102624329 LOC100797797 LOC100262013 LOC18098430 LOC11414679 LOC101250484 LOC102597081 LOC107824878 LOC107815402 LOC4332221 LOC100381696 LOC123080198 LOC123071881 LOC123062992 LOC123445155 LOC8056145 LOC100830500
Function* integrator complex subunit integrator complex subunit 9 integrator complex subunit 9 integrator complex subunit 9-like integrator complex subunit 9 homolog integrator complex subunit 9 homolog uncharacterized LOC102624329 integrator complex subunit 9 uncharacterized LOC100262013 uncharacterized LOC18098430 integrator complex subunit 9 uncharacterized LOC101250484 integrator complex subunit 9 uncharacterized LOC107824878 uncharacterized LOC107815402 uncharacterized LOC4332221 uncharacterized LOC100381696 integrator complex subunit 9 homolog integrator complex subunit 9 homolog integrator complex subunit 9 integrator complex subunit 9 homolog integrator complex subunit 9 homolog integrator complex subunit 9 homolog
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 3
ghi01232 Nucleotide metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03015 mRNA surveillance pathway 4
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00562 Inositol phosphate metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 6
tae03013 Nucleocytoplasmic transport 5
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819942 103870661 106452933 106400697 107928034 107962357 102624329 100797797 100262013 18098430 11414679 101250484 102597081 107824878 107815402 4332221 100381696 123080198 123071881 123062992 123445155 8056145 100830500
The preparation time of this page was 0.1 [sec].