Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G08880   plectin-like protein 
 ath-r.7   AT3G08880   plectin-like protein 
 ath-m.9   AT3G08880   plectin-like protein 
 ath-e.2   AT3G08880   plectin-like protein 
 ath-m.4.bio   AT3G08880   plectin-like protein 
 ath-m.4.hor   AT3G08880   plectin-like protein 
 ath-m.4.lig   AT3G08880   plectin-like protein 
 ath-m.4.str   AT3G08880   plectin-like protein 
 ath-m.4.tis   AT3G08880   plectin-like protein 
 bra-r.6   103859326   kinetochore protein SPC24 homolog 
 bra-r.6   103848712   kinetochore protein SPC24 homolog 
 bna-r.1   125580412   kinetochore protein SPC24 homolog 
 bna-r.1   106427880   kinetochore protein SPC24 homolog 
 ghi-r.1   107918024   kinetochore protein SPC24 homolog 
 ghi-r.1   107921615   kinetochore protein SPC24 homolog 
 ghi-r.1   107936178   uncharacterized LOC107936178 
 cit-r.1   102625821   kinetochore protein SPC24 homolog 
 gma-u.5   100791171   kinetochore protein SPC24 homolog 
 gma-u.5   100784877   uncharacterized LOC100784877 
 vvi-u.5   100247080   kinetochore protein SPC24 homolog 
 ppo-u.5   7460384   kinetochore protein SPC24 homolog 
 mtr-u.5   11419753   kinetochore protein SPC24 homolog 
 sly-u.5   101260043   kinetochore protein SPC24 homolog 
 sot-r.1   102601760   kinetochore protein spc24 
 nta-r.1   107761758   kinetochore protein SPC24 homolog 
 nta-r.1   107769550   kinetochore protein SPC24 homolog 
 osa-u.5   4335959   kinetochore protein SPC24 homolog 
 zma-u.5   100277987   uncharacterized LOC100277987 
 zma-u.5   100274670   uncharacterized LOC100274670 
 tae-r.2   123185523   kinetochore protein SPC24 homolog 
 tae-r.2   123049430   kinetochore protein SPC24 homolog 
 tae-r.2   123045573   kinetochore protein SPC24 homolog 
 hvu-r.1   123426822   kinetochore protein SPC24 homolog 
 sbi-r.1   8082174   uncharacterized LOC8082174 
 sbi-r.1   8075865   myosin-2 
 bdi-r.1   100824249   uncharacterized LOC100824249 

close


Top 50 coexpressed genes to AT3G08880 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G08880 (ath-u.5 coexpression data)

CoexMap"820036"


athAT3G08880 | Entrez gene ID : 820036      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 2 3 1 2 1 1 1 1 1 2 1 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051983 [list] [network] regulation of chromosome segregation  (7 genes)  IMP  
GO:0051781 [list] [network] positive regulation of cell division  (15 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (56 genes)  IMP  
GO CC
GO:0031262 [list] [network] Ndc80 complex  (4 genes)  ISS  
GO:0000776 [list] [network] kinetochore  (19 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_187500.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1,  extr 1,  pero 1,  cyto_pero 1  (predict for NP_187500.2)
Subcellular
localization
TargetP
other 8  (predict for NP_187500.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G08880
ath-r.7
for
AT3G08880
ath-m.9
for
AT3G08880
ath-e.2
for
AT3G08880
ath-m.4.bio
for
AT3G08880
ath-m.4.hor
for
AT3G08880
ath-m.4.lig
for
AT3G08880
ath-m.4.str
for
AT3G08880
ath-m.4.tis
for
AT3G08880
bra-r.6
for
103859326
bra-r.6
for
103848712
bna-r.1
for
125580412
bna-r.1
for
106427880
ghi-r.1
for
107918024
ghi-r.1
for
107921615
ghi-r.1
for
107936178
cit-r.1
for
102625821
gma-u.5
for
100791171
gma-u.5
for
100784877
vvi-u.5
for
100247080
ppo-u.5
for
7460384
mtr-u.5
for
11419753
sly-u.5
for
101260043
sot-r.1
for
102601760
nta-r.1
for
107761758
nta-r.1
for
107769550
osa-u.5
for
4335959
zma-u.5
for
100277987
zma-u.5
for
100274670
tae-r.2
for
123185523
tae-r.2
for
123049430
tae-r.2
for
123045573
hvu-r.1
for
123426822
sbi-r.1
for
8082174
sbi-r.1
for
8075865
bdi-r.1
for
100824249


Ortholog ID: 5727
Species ath bra bra bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi
Symbol AT3G08880 LOC103859326 LOC103848712 LOC125580412 LOC107958079 LOC121213760 LOC107898969 LOC102625821 LOC100791171 LOC100784877 LOC100247080 LOC7460384 LOC11419753 LOC101260043 LOC102601760 LOC107761758 LOC107769550 LOC4335959 LOC100277987 LOC100274670 LOC123185523 LOC123049430 LOC123045573 LOC123426822 LOC8082174 LOC8075865 LOC100824249
Function* plectin-like protein kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog uncharacterized LOC121213760 uncharacterized LOC107898969 kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog uncharacterized LOC100784877 kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein spc24 kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog uncharacterized LOC100277987 uncharacterized LOC100274670 kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog kinetochore protein SPC24 homolog uncharacterized LOC8082174 myosin-2 uncharacterized LOC100824249
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03010 Ribosome 4
sly03018 RNA degradation 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03030 DNA replication 3
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 3
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820036 103859326 103848712 125580412 107958079 121213760 107898969 102625821 100791171 100784877 100247080 7460384 11419753 101260043 102601760 107761758 107769550 4335959 100277987 100274670 123185523 123049430 123045573 123426822 8082174 8075865 100824249
The preparation time of this page was 0.1 [sec].