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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FLD   protein FLOWERING locus D-like protein 
 ath-r.7   FLD   protein FLOWERING locus D-like protein 
 ath-m.9   FLD   protein FLOWERING locus D-like protein 
 ath-e.2   FLD   protein FLOWERING locus D-like protein 
 ath-m.4.bio   FLD   protein FLOWERING locus D-like protein 
 ath-m.4.hor   FLD   protein FLOWERING locus D-like protein 
 ath-m.4.lig   FLD   protein FLOWERING locus D-like protein 
 ath-m.4.str   FLD   protein FLOWERING locus D-like protein 
 ath-m.4.tis   FLD   protein FLOWERING locus D-like protein 
 bra-r.6   103859346   protein FLOWERING LOCUS D 
 bna-r.1   106353016   protein FLOWERING LOCUS D 
 bna-r.1   106439248   protein FLOWERING LOCUS D 
 ghi-r.1   107914094   protein FLOWERING LOCUS D 
 ghi-r.1   107957402   protein FLOWERING LOCUS D 
 ghi-r.1   107942507   protein FLOWERING LOCUS D 
 cit-r.1   102610306   protein FLOWERING LOCUS D 
 gma-u.5   FLD   protein FLOWERING LOCUS D 
 vvi-u.5   100259817   protein FLOWERING LOCUS D 
 ppo-u.5   7494936   protein FLOWERING LOCUS D 
 ppo-u.5   7463452   protein FLOWERING LOCUS D 
 mtr-u.5   25483267   protein FLOWERING LOCUS D 
 sly-u.5   101267859   protein FLOWERING LOCUS D 
 sot-r.1   102602563   protein FLOWERING LOCUS D 
 nta-r.1   107816791   protein FLOWERING LOCUS D-like 
 nta-r.1   107805384   protein FLOWERING LOCUS D-like 
 nta-r.1   107791767   protein FLOWERING LOCUS D 
 osa-u.5   4336650   Flavin-containing amine oxidase domain-containing protein 3 
 zma-u.5   100281678   flowering locus D 
 tae-r.2   123190077   lysine-specific histone demethylase 1 homolog 3 
 tae-r.2   123054187   lysine-specific histone demethylase 1 homolog 3 
 tae-r.2   123046332   Flavin containing amine oxidoreductase 
 hvu-r.1   123427518   Flavin containing amine oxidoreductase 
 sbi-r.1   8057566   lysine-specific histone demethylase 1 homolog 3 
 bdi-r.1   100846366   Flavin containing amine oxidoreductase 

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Top 50 coexpressed genes to FLD (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FLD (ath-u.5 coexpression data)

CoexMap""


athFLD | Entrez gene ID : 820202      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 1 1 2 1 1 1 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function protein FLOWERING locus D-like protein
KEGG
GO BP
GO:1904629 [list] [network] response to diterpene  (3 genes)  IEP IMP  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0009911 [list] [network] positive regulation of flower development  (44 genes)  IMP  
GO:0009627 [list] [network] systemic acquired resistance  (68 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0032452 [list] [network] histone demethylase activity  (15 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001326314.1 [sequence] [blastp]
NP_001326315.1 [sequence] [blastp]
NP_001326316.1 [sequence] [blastp]
NP_187650.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001326314.1)
chlo 8,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001326315.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for NP_001326316.1)
chlo 4,  chlo_mito 4,  mito 4  (predict for NP_187650.4)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326314.1)
chlo 9  (predict for NP_001326315.1)
chlo 8,  mito 5  (predict for NP_001326316.1)
chlo 8,  mito 5  (predict for NP_187650.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FLD
ath-r.7
for
FLD
ath-m.9
for
FLD
ath-e.2
for
FLD
ath-m.4.bio
for
FLD
ath-m.4.hor
for
FLD
ath-m.4.lig
for
FLD
ath-m.4.str
for
FLD
ath-m.4.tis
for
FLD
bra-r.6
for
103859346
bna-r.1
for
106353016
bna-r.1
for
106439248
ghi-r.1
for
107914094
ghi-r.1
for
107957402
ghi-r.1
for
107942507
cit-r.1
for
102610306
gma-u.5
for
FLD
vvi-u.5
for
100259817
ppo-u.5
for
7494936
ppo-u.5
for
7463452
mtr-u.5
for
25483267
sly-u.5
for
101267859
sot-r.1
for
102602563
nta-r.1
for
107816791
nta-r.1
for
107805384
nta-r.1
for
107791767
osa-u.5
for
4336650
zma-u.5
for
100281678
tae-r.2
for
123190077
tae-r.2
for
123054187
tae-r.2
for
123046332
hvu-r.1
for
123427518
sbi-r.1
for
8057566
bdi-r.1
for
100846366

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Ortholog ID: 7991
Species ath bra bna bna ghi ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol FLD LOC103859346 LOC106353016 LOC106439248 LOC107914094 LOC107957402 LOC107942507 LOC102610306 FLD LOC100259817 LOC7494936 LOC7463452 LOC25483267 LOC101267859 LOC102602563 LOC107816791 LOC107791767 LOC107780427 LOC4336650 LOC100281678 LOC123190077 LOC123054187 LOC123046332 LOC123427518 LOC8057566 LOC100846366
Function* protein FLOWERING locus D-like protein protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D protein FLOWERING LOCUS D-like protein FLOWERING LOCUS D protein FLOWERING LOCUS D Flavin-containing amine oxidase domain-containing protein 3 flowering locus D lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 Flavin containing amine oxidoreductase Flavin containing amine oxidoreductase lysine-specific histone demethylase 1 homolog 3 Flavin containing amine oxidoreductase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820202 103859346 106353016 106439248 107914094 107957402 107942507 102610306 100786453 100259817 7494936 7463452 25483267 101267859 102602563 107816791 107791767 107780427 4336650 100281678 123190077 123054187 123046332 123427518 8057566 100846366
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