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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT3G10530   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100802940   probable U3 small nucleolar RNA-associated protein 7 
 gma-u.5   100786818   probable U3 small nucleolar RNA-associated protein 7 
 vvi-u.5   100241077   probable U3 small nucleolar RNA-associated protein 7 
 ppo-u.5   18101332   probable U3 small nucleolar RNA-associated protein 7 
 ppo-u.5   7463481   probable U3 small nucleolar RNA-associated protein 7 
 mtr-u.5   25484858   probable U3 small nucleolar RNA-associated protein 7 
 sly-u.5   101255588   probable U3 small nucleolar RNA-associated protein 7 
 osa-u.5   4325333   probable U3 small nucleolar RNA-associated protein 7 
 zma-u.5   100191648   Transducin/WD40 repeat-like superfamily protein 

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Top 50 coexpressed genes to AT3G10530 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G10530 (ath-u.5 coexpression data)

CoexMap"820218"


athAT3G10530 | Entrez gene ID : 820218      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_187664.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_187664.2)
Subcellular
localization
TargetP
other 9  (predict for NP_187664.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G10530

.
ath-r.7
for
AT3G10530

.
ath-m.9
for
AT3G10530

.
ath-e.2
for
AT3G10530

.
ath-m.4.bio
for
AT3G10530

.
ath-m.4.hor
for
AT3G10530

.
ath-m.4.lig
for
AT3G10530

.
ath-m.4.str
for
AT3G10530

.
ath-m.4.tis
for
AT3G10530

.
gma-u.5
for
100802940

.
gma-u.5
for
100786818

.
vvi-u.5
for
100241077

.
ppo-u.5
for
18101332

.
ppo-u.5
for
7463481

.
mtr-u.5
for
25484858

.
sly-u.5
for
101255588

.
osa-u.5
for
4325333

.
zma-u.5
for
100191648

.


Ortholog ID: 6547
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta
Symbol AT3G10530 LOC100802940 LOC100786818 LOC101255588 LOC4325333 LOC100191648 LOC103847471 LOC103870457 LOC100241077 LOC7463481 LOC18101332 LOC25484858 LOC123096079 LOC123428494 LOC123447738 LOC107948551 LOC107954856 LOC106452611 LOC106381189 CHLRE_12g502800v5 LOC8066379 LOC8059589 LOC102580260 LOC102630013 LOC100824357 LOC100821902 LOC107810614
Function* Transducin/WD40 repeat-like superfamily protein probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 Transducin/WD40 repeat-like superfamily protein probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 uncharacterized protein probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 probable U3 small nucleolar RNA-associated protein 7 putative U3 small nucleolar RNA-associated protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03010 Ribosome 3
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820218 100802940 100786818 101255588 4325333 100191648 103847471 103870457 100241077 7463481 18101332 25484858 123096079 123428494 123447738 107948551 107954856 106452611 106381189 5716416 8066379 8059589 102580260 102630013 100824357 100821902 107810614
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