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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NUP1   nuclear pore complex protein 
 ath-r.7   NUP1   nuclear pore complex protein 
 ath-m.9   NUP1   nuclear pore complex protein 
 ath-e.2   NUP1   nuclear pore complex protein 
 ath-m.4.bio   NUP1   nuclear pore complex protein 
 ath-m.4.hor   NUP1   nuclear pore complex protein 
 ath-m.4.lig   NUP1   nuclear pore complex protein 
 ath-m.4.str   NUP1   nuclear pore complex protein 
 ath-m.4.tis   NUP1   nuclear pore complex protein 
 bra-r.6   103847375   nuclear pore complex protein NUP1 
 bra-r.6   103859355   nuclear pore complex protein NUP1 
 bna-r.1   106434568   nuclear pore complex protein NUP1 
 bna-r.1   106389079   nuclear pore complex protein NUP1 
 bna-r.1   106353025   nuclear pore complex protein NUP1-like 
 ghi-r.1   107927563   nuclear pore complex protein NUP1 
 ghi-r.1   121215883   nuclear pore complex protein NUP1-like 
 ghi-r.1   121202899   nuclear pore complex protein NUP1 
 cit-r.1   102611700   nuclear pore complex protein NUP1 
 gma-u.5   100804833   nuclear pore complex protein NUP1 
 gma-u.5   100803645   nuclear pore complex protein NUP1 
 gma-u.5   100815527   nuclear pore complex protein NUP1 
 vvi-u.5   100261025   nuclear pore complex protein NUP1 
 ppo-u.5   7469510   nuclear pore complex protein NUP1 
 ppo-u.5   7486875   nuclear pore complex protein NUP1 
 mtr-u.5   11422934   nuclear pore complex protein NUP1 
 mtr-u.5   11419842   nuclear pore complex protein NUP1 
 sly-u.5   101264427   nuclear pore complex protein NUP1-like 
 sly-u.5   101267283   nuclear pore complex protein NUP1 
 sot-r.1   102586138   nuclear pore complex protein DDB_G0274915-like 
 sot-r.1   102599825   nuclear pore complex protein NUP1-like 
 nta-r.1   107818101   uncharacterized LOC107818101 
 nta-r.1   107793419   nuclear pore complex protein NUP1-like 
 nta-r.1   107763970   nuclear pore complex protein NUP1 
 osa-u.5   4352173   nuclear pore complex protein NUP1 
 zma-u.5   100272797   Nuclear pore complex protein NUP1 
 tae-r.2   123120397   nuclear pore complex protein NUP1 
 tae-r.2   123110904   nuclear pore complex protein NUP1 
 tae-r.2   123102888   nuclear pore complex protein NUP1 
 hvu-r.1   123397694   nuclear pore complex protein NUP1-like 
 sbi-r.1   8155668   nuclear pore complex protein NUP1 
 bdi-r.1   100842057   nuclear pore complex protein NUP1 

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Top 50 coexpressed genes to NUP1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NUP1 (ath-u.5 coexpression data)

CoexMap"820234"


athNUP1 | Entrez gene ID : 820234      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 2 2 2 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (7 genes)  IMP  
GO:0006997 [list] [network] nucleus organization  (51 genes)  IMP  
GO CC
GO:0034399 [list] [network] nuclear periphery  (8 genes)  IDA  
GO:0005643 [list] [network] nuclear pore  (18 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (107 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327263.1 [sequence] [blastp]
NP_187676.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for NP_001327263.1)
nucl 8,  chlo 2  (predict for NP_187676.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001327263.1)
other 4,  chlo 4  (predict for NP_187676.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NUP1
ath-r.7
for
NUP1
ath-m.9
for
NUP1
ath-e.2
for
NUP1
ath-m.4.bio
for
NUP1
ath-m.4.hor
for
NUP1
ath-m.4.lig
for
NUP1
ath-m.4.str
for
NUP1
ath-m.4.tis
for
NUP1
bra-r.6
for
103847375
bra-r.6
for
103859355
bna-r.1
for
106434568
bna-r.1
for
106389079
bna-r.1
for
106353025
ghi-r.1
for
107927563
ghi-r.1
for
121215883
ghi-r.1
for
121202899
cit-r.1
for
102611700
gma-u.5
for
100804833
gma-u.5
for
100803645
gma-u.5
for
100815527
vvi-u.5
for
100261025
ppo-u.5
for
7469510
ppo-u.5
for
7486875
mtr-u.5
for
11422934
mtr-u.5
for
11419842
sly-u.5
for
101264427
sly-u.5
for
101267283
sot-r.1
for
102586138
sot-r.1
for
102599825
nta-r.1
for
107818101
nta-r.1
for
107793419
nta-r.1
for
107763970
osa-u.5
for
4352173
zma-u.5
for
100272797
tae-r.2
for
123120397
tae-r.2
for
123110904
tae-r.2
for
123102888
hvu-r.1
for
123397694
sbi-r.1
for
8155668
bdi-r.1
for
100842057


Ortholog ID: 4901
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol NUP1 LOC103847375 LOC103859355 LOC106434568 LOC106389079 LOC106353025 LOC107927563 LOC107927562 LOC107927557 LOC102611700 LOC100803645 LOC100815527 LOC100818785 LOC100261025 LOC7469510 LOC7486875 LOC11422934 LOC11419842 LOC101264427 LOC101267283 LOC102586138 LOC102599825 LOC107793419 LOC107763970 LOC107783266 LOC4352173 LOC100272797 LOC123120397 LOC123110904 LOC123102888 LOC123397694 LOC8155668 LOC100842057
Function* nuclear pore complex protein nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1-like nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1-like nuclear pore complex protein NUP1 nuclear pore complex protein DDB_G0274915-like nuclear pore complex protein NUP1-like nuclear pore complex protein NUP1-like nuclear pore complex protein NUP1 uncharacterized LOC107783266 nuclear pore complex protein NUP1 Nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1-like nuclear pore complex protein NUP1 nuclear pore complex protein NUP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03040 Spliceosome 2
cit03015 mRNA surveillance pathway 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820234 103847375 103859355 106434568 106389079 106353025 107927563 107927562 107927557 102611700 100803645 100815527 100818785 100261025 7469510 7486875 11422934 11419842 101264427 101267283 102586138 102599825 107793419 107763970 107783266 4352173 100272797 123120397 123110904 123102888 123397694 8155668 100842057
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