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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G11110   RING/U-box superfamily protein 
 ath-r.7   AT3G11110   RING/U-box superfamily protein 
 ath-m.9   AT3G11110   RING/U-box superfamily protein 
 ath-e.2   AT3G11110   RING/U-box superfamily protein 
 ath-m.4.bio   AT3G11110   RING/U-box superfamily protein 
 ath-m.4.hor   AT3G11110   RING/U-box superfamily protein 
 ath-m.4.lig   AT3G11110   RING/U-box superfamily protein 
 ath-m.4.str   AT3G11110   RING/U-box superfamily protein 
 ath-m.4.tis   AT3G11110   RING/U-box superfamily protein 
 gma-u.5   100803278   RING-H2 finger protein ATL66 
 gma-u.5   100794927   RING-H2 finger protein ATL66 
 vvi-u.5   104879527   RING-H2 finger protein ATL64 
 mtr-u.5   120580589   RING-H2 finger protein ATL66 
 mtr-u.5   11411371   RING-H2 finger protein ATL66 
 osa-u.5   9267076   RING-H2 finger protein ATL66 
 zma-u.5   100502077   RING-H2 finger protein ATL66 

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Top 50 coexpressed genes to AT3G11110 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G11110 (ath-u.5 coexpression data)

CoexMap"820282"


athAT3G11110 | Entrez gene ID : 820282      
Species ath gma vvi mtr osa zma tae hvu ghi bdi cit bra cre sbi ppo bna sly nta sot
Paralog 9 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_187722.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  nucl 2,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for NP_187722.1)
Subcellular
localization
TargetP
other 9  (predict for NP_187722.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G11110

.
ath-r.7
for
AT3G11110

.
ath-m.9
for
AT3G11110

.
ath-e.2
for
AT3G11110

.
ath-m.4.bio
for
AT3G11110

.
ath-m.4.hor
for
AT3G11110

.
ath-m.4.lig
for
AT3G11110

.
ath-m.4.str
for
AT3G11110

.
ath-m.4.tis
for
AT3G11110

.
gma-u.5
for
100803278

.
gma-u.5
for
100794927

.
vvi-u.5
for
104879527

.
mtr-u.5
for
120580589

.
mtr-u.5
for
11411371

.
osa-u.5
for
9267076

.
zma-u.5
for
100502077

.


Ortholog ID: 4718
Species ath gma osa zma bra bra vvi mtr mtr hvu ghi ghi bna bna sbi cit bdi nta
Symbol AT3G11110 LOC100794927 LOC9267076 LOC100502077 LOC103870373 LOC103859378 LOC104879527 LOC11411371 LOC120580589 LOC123414257 LOC107900215 LOC107936333 LOC106345523 LOC106439271 LOC8061796 LOC127901759 LOC100825400 LOC107762990
Function* RING/U-box superfamily protein RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL64 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66-like RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66-like RING-H2 finger protein ATL66-like RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66 RING-H2 finger protein ATL66-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 9
vvi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00061 Fatty acid biosynthesis 2
mtr00780 Biotin metabolism 2
mtr01212 Fatty acid metabolism 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi00195 Photosynthesis 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820282 100794927 9267076 100502077 103870373 103859378 104879527 11411371 120580589 123414257 107900215 107936333 106345523 106439271 8061796 127901759 100825400 107762990
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