ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	AT3G12190	golgin family A protein
ath-m.4.bio	AT3G12190	golgin family A protein
ath-m.4.hor	AT3G12190	golgin family A protein
ath-m.4.lig	AT3G12190	golgin family A protein
ath-m.4.str	AT3G12190	golgin family A protein
ath-m.4.tis	AT3G12190	golgin family A protein
ghi-r.1	107895009	FRIGIDA-like protein 5
ghi-r.1	107895024	FRIGIDA-like protein 5
vvi-u.5	104881434	inactive FRIGIDA-like protein 2
ppo-u.5	18098881	FRIGIDA-like protein 5
sly-u.5	101259893	uncharacterized LOC101259893
sot-r.1	102578235	FRIGIDA-like protein 5
sot-r.1	102584734	uncharacterized LOC102584734
nta-r.1	107828133	uncharacterized LOC107828133
nta-r.1	107825057	uncharacterized LOC107825057
nta-r.1	107798267	uncharacterized LOC107798267

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(2598 genes)

ISM

GO MF

Protein

NP_187826.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 4

(predict for NP_187826.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for NP_187826.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT3G12190	ath-m.4.bio for AT3G12190	ath-m.4.hor for AT3G12190	ath-m.4.lig for AT3G12190	ath-m.4.str for AT3G12190	ath-m.4.tis for AT3G12190	ghi-r.1 for 107895009	ghi-r.1 for 107895024	vvi-u.5 for 104881434	ppo-u.5 for 18098881	sly-u.5 for 101259893	sot-r.1 for 102578235	sot-r.1 for 102584734	nta-r.1 for 107828133	nta-r.1 for 107825057	nta-r.1 for 107798267

Ortholog

Ortholog ID: 9472

Species

ghi

cit

vvi

ppo

sly

sot

nta

Symbol

Function^*

FRIGIDA-like protein 5

uncharacterized LOC102631218

FRIGIDA-like protein 5

inactive FRIGIDA-like protein 2

FRIGIDA-like protein 5

uncharacterized LOC101259893

FRIGIDA-like protein 5

uncharacterized LOC102584734

uncharacterized LOC107794521

uncharacterized LOC107785103

uncharacterized LOC107766600

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit04016	MAPK signaling pathway - plant	3
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

107895009

107895024

102631218

102630417

102619182

104881434

18098881

101259893

102578235

102584734

107794521

107785103

107766600


Species	ath	ghi	vvi	ppo	sly	sot	nta	zma	gma	cit	osa	hvu	mtr	bra	sbi	cre	tae	bdi	bna
Paralog	6	2	1	1	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G12190 (ath-m.9 coexpression data)

Top 50 enrichment test to AT3G12190 (ath-m.9 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G12190 (ath-m.9 coexpression data)

Top 50 enrichment test to AT3G12190 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**