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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FDM3   XH/XS domain-containing protein 
 ath-r.7   FDM3   XH/XS domain-containing protein 
 ath-m.9   FDM3   XH/XS domain-containing protein 
 ath-e.2   FDM3   XH/XS domain-containing protein 
 ath-m.4.bio   FDM3   XH/XS domain-containing protein 
 ath-m.4.hor   FDM3   XH/XS domain-containing protein 
 ath-m.4.lig   FDM3   XH/XS domain-containing protein 
 ath-m.4.str   FDM3   XH/XS domain-containing protein 
 ath-m.4.tis   FDM3   XH/XS domain-containing protein 
 bra-r.6   103870246   factor of DNA methylation 3 
 bra-r.6   117133490   factor of DNA methylation 3 
 bna-r.1   106433434   factor of DNA methylation 3 
 bna-r.1   106452382   factor of DNA methylation 3 
 bna-r.1   125585677   factor of DNA methylation 3-like 

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Top 50 coexpressed genes to FDM3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FDM3 (ath-u.5 coexpression data)

CoexMap"820435"


athFDM3 | Entrez gene ID : 820435      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (44 genes)  IEA IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001189872.1 [sequence] [blastp]
NP_001326247.1 [sequence] [blastp]
NP_001326248.1 [sequence] [blastp]
NP_001326249.1 [sequence] [blastp]
NP_187861.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for NP_001189872.1)
cyto 9  (predict for NP_001326247.1)
cyto 9  (predict for NP_001326248.1)
cyto 6,  vacu 1,  chlo 1,  nucl 1,  mito 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_001326249.1)
cyto 9  (predict for NP_187861.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001189872.1)
other 8  (predict for NP_001326247.1)
other 8  (predict for NP_001326248.1)
other 8  (predict for NP_001326249.1)
other 8  (predict for NP_187861.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FDM3
ath-r.7
for
FDM3
ath-m.9
for
FDM3
ath-e.2
for
FDM3
ath-m.4.bio
for
FDM3
ath-m.4.hor
for
FDM3
ath-m.4.lig
for
FDM3
ath-m.4.str
for
FDM3
ath-m.4.tis
for
FDM3
bra-r.6
for
103870246
bra-r.6
for
117133490
bna-r.1
for
106433434
bna-r.1
for
106452382
bna-r.1
for
125585677


Ortholog ID: 19274
Species ath bra bra bna bna bna
Symbol FDM3 LOC103870246 LOC117133490 LOC106433434 LOC106452382 LOC125585677
Function* XH/XS domain-containing protein factor of DNA methylation 3 factor of DNA methylation 3 factor of DNA methylation 3 factor of DNA methylation 3 factor of DNA methylation 3-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820435 103870246 117133490 106433434 106452382 125585677
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