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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   EBP   ethylene-responsive element binding protein 
 ath-r.7   EBP   ethylene-responsive element binding protein 
 ath-m.9   EBP   ethylene-responsive element binding protein 
 ath-e.2   EBP   ethylene-responsive element binding protein 
 ath-m.4.bio   EBP   ethylene-responsive element binding protein 
 ath-m.4.hor   EBP   ethylene-responsive element binding protein 
 ath-m.4.lig   EBP   ethylene-responsive element binding protein 
 ath-m.4.str   EBP   ethylene-responsive element binding protein 
 ath-m.4.tis   EBP   ethylene-responsive element binding protein 
 bra-r.6   103859682   ethylene-responsive transcription factor RAP2-3 
 bra-r.6   103869736   ethylene-responsive transcription factor RAP2-3 
 bra-r.6   103839768   ethylene-responsive transcription factor RAP2-3 
 bna-r.1   106452069   ethylene-responsive transcription factor RAP2-3 
 bna-r.1   106439447   ethylene-responsive transcription factor RAP2-3 
 bna-r.1   106355226   ethylene-responsive transcription factor RAP2-3-like 
 ghi-r.1   121222257   ethylene-responsive transcription factor RAP2-3 
 ghi-r.1   107940910   ethylene-responsive transcription factor RAP2-3-like 
 ghi-r.1   107926521   ethylene-responsive transcription factor RAP2-3-like 
 cit-r.1   102627706   ethylene-responsive transcription factor RAP2-3 
 gma-u.5   100779626   ethylene-responsive transcription factor RAP2-3 
 gma-u.5   100527415   APETALA2/ethylene responsive factor-like protein 
 gma-u.5   ERF5   ethylene-responsive transcription factor RAP2-3-like 
 vvi-u.5   100249982   ethylene-responsive transcription factor RAP2-3 
 ppo-u.5   18101897   ethylene-responsive transcription factor RAP2-3 
 ppo-u.5   7477223   ethylene-responsive transcription factor RAP2-3 
 mtr-u.5   25488059   ethylene-responsive transcription factor ERF071 
 sly-u.5   ERF6   ethylene response factor 
 sot-r.1   102594588   ethylene-responsive transcription factor RAP2-3 
 nta-r.1   107817958   ethylene-responsive transcription factor RAP2-3-like 
 nta-r.1   107772127   ethylene-responsive transcription factor RAP2-3 
 tae-r.2   123139074   ethylene-responsive transcription factor RAP2-3 
 tae-r.2   123169328   ethylene-responsive transcription factor RAP2-3 
 hvu-r.1   123412228   ethylene-responsive transcription factor RAP2-3-like 
 bdi-r.1   100834608   ethylene-responsive transcription factor RAP2-3 

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Top 50 coexpressed genes to EBP (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EBP (ath-u.5 coexpression data)

CoexMap"820929"


athEBP | Entrez gene ID : 820929      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta tae hvu bdi zma cre osa sbi
Paralog 9 3 3 3 1 3 1 2 1 1 1 2 2 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090548 [list] [network] response to nitrate starvation  (14 genes)  IEP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (61 genes)  TAS  
GO:0010286 [list] [network] heat acclimation  (64 genes)  IMP  
GO:0012501 [list] [network] programmed cell death  (103 genes)  IMP  
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO:0001666 [list] [network] response to hypoxia  (271 genes)  IEP  
GO:0051707 [list] [network] response to other organism  (1189 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM TAS  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA TAS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA IMP ISS TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_188299.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_188299.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188299.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
EBP
ath-r.7
for
EBP
ath-m.9
for
EBP
ath-e.2
for
EBP
ath-m.4.bio
for
EBP
ath-m.4.hor
for
EBP
ath-m.4.lig
for
EBP
ath-m.4.str
for
EBP
ath-m.4.tis
for
EBP
bra-r.6
for
103859682
bra-r.6
for
103869736
bra-r.6
for
103839768
bna-r.1
for
106452069
bna-r.1
for
106439447
bna-r.1
for
106355226
ghi-r.1
for
121222257
ghi-r.1
for
107940910
ghi-r.1
for
107926521
cit-r.1
for
102627706
gma-u.5
for
100779626
gma-u.5
for
100527415
gma-u.5
for
ERF5
vvi-u.5
for
100249982
ppo-u.5
for
18101897
ppo-u.5
for
7477223
mtr-u.5
for
25488059
sly-u.5
for
ERF6
sot-r.1
for
102594588
nta-r.1
for
107817958
nta-r.1
for
107772127
tae-r.2
for
123139074
tae-r.2
for
123169328
hvu-r.1
for
123412228
bdi-r.1
for
100834608


Ortholog ID: 7210
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta tae tae hvu bdi
Symbol EBP LOC103859682 LOC103869736 LOC103839768 LOC106439447 LOC106355226 LOC106397750 LOC121222257 LOC107940910 LOC107896651 LOC102627706 LOC100779626 LOC100527415 ERF5 LOC100249982 LOC18101897 LOC7477223 LOC25488059 ERF6 LOC102594588 LOC107817958 LOC107772127 LOC123139074 LOC123169328 LOC123412228 LOC100834608
Function* ethylene-responsive element binding protein ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3-like ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3-like ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 APETALA2/ethylene responsive factor-like protein ethylene-responsive transcription factor RAP2-3-like ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor ERF071 ethylene response factor ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3-like ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3 ethylene-responsive transcription factor RAP2-3-like ethylene-responsive transcription factor RAP2-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 2
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
gma00940 Phenylpropanoid biosynthesis 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 10
ppo04075 Plant hormone signal transduction 10
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 9
ppo04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 5
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta04146 Peroxisome 3
nta04016 MAPK signaling pathway - plant 3
nta03050 Proteasome 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta00940 Phenylpropanoid biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 2
tae01040 Biosynthesis of unsaturated fatty acids 2
tae01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820929 103859682 103869736 103839768 106439447 106355226 106397750 121222257 107940910 107896651 102627706 100779626 100527415 100817253 100249982 18101897 7477223 25488059 101055565 102594588 107817958 107772127 123139074 123169328 123412228 100834608
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